Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02117 ATGGCAGCCTCACTTTCCGACGACCTCCGTCTACCAATCCTACCACCACCGCAGTCGAAAAATAAAACGGAAAATGAAAAGATCTGCATAGACGAGATGCTTCAGAAGTACTGCGGAGAGTTCGGAAAGTGGCAGTTGAAACACTTCATTCTGACGAGTCTAGCTTGGGCACTGGAAGCTTTTCATACTATGGTTATGATTTTTGCTGATCGGGAACCTGATTGGAGGTGCGTTACCGGTGATTGCGACGGCGGAGGAAGTGTTTGTGGTTTGAAAAGGGAGACGTGGGAGTGGATTGGTGGGAGCGGTGCTTCAACCGTTTCTGATTGGAGTTTGATTTGTGGTGATAAGTTTAAAGTTGGACTTGTTCAATCTGTTTTCTTTGCTGGCTGTATGATTGGAGCTGGAGTATTTGGTCACCTCTCTGACTCATCTCTAGGAAGAAAAGGTTCTCTAACAGTTGTTTGCGCCCTAAACGCCATATTTGGCTGCCTAACAGCATTTTCCCCTAACTATTGGATCTATGTCTTCCTCCGCCTCCTCACCGGTTTCAGCAGCGGAGGTGTTGGCCTCTGCGCCTTCGTTCTCGCCACTGAGCCCATTGGCCCATCAAAGCGAGGTACATCAGGAATGTCCACCTTTTACTTCTTCTCCGGCGGCATTGCAATTCTCTCTGGCATCGCCTATACCTTCCAAACATGGCGTCTACTCTACATCGCCACCTCCATCCCCTCCCTTTTGTACATAGCCCTAGTCCTTCCATTCGTTTCTGAGTCTCCAAGATGGTACCTCGTTCGAGGTAGAGTTAAGGAAGCCACTATGCTCATGTCCACCATTGCTTCTTTCAATGGCAAACACCTTCCTGAAGGTGTTCACCTTGCAATCGATGAAGAAGTATCAAAATCAAAAGCAACAAATGATCATGAATTCTCATCCATAGTTGAAAACAAGGATGCTCAAATTGGATCTATTTTGGATGTTATACGCTATCCAGTTACGCGTATTAGGTTAATTCTTGCGGTAGCTCTTAACTTCTTAGGCTCTGTTGTGTACTATGGTCTAAGCTTAAATGTGGCAAACCTCGAAACCAATCTTTACATGAACGTGCTTCTAAATGCGGTGGCAGAGATGCCAGCGTTCACGATAACTGCGGTGTTGTTGGATAGGTTTGGGAGGAAGCCATTGACAATTGGGACAATGTGGTTTAGTGGATTCTTTTGCTTGATGGGGAGTATGATGGGTGGTATGGGGGTGTGGAAAGTAATTAAAATGGTGTGTGGTGTTTTGGGAATATTTGGGATGGCGGGGACTTATAACTTGTTGTTCATTTACACGGCAGAGCTATTTCCTACGGTGGTGAGAAATGTGGCGCTTGGGAGTACGACACAAGCGGCGCAAATGGGGGCGATATTGGCGCCATTTGTGGTGGTTTTGGGTGGTTGGTTGCCGTTTGGGGTGTTTGCAGTTTGTGGGATAGTAGGTGGGATGTTTGCATTTAATTTGCCGGAGACAATGAATATGCCTCTTTATGATACATTCAATGGATTGGAGGCTGGACTTGCATGA 1566 0.4636 MAASLSDDLRLPILPPPQSKNKTENEKICIDEMLQKYCGEFGKWQLKHFILTSLAWALEAFHTMVMIFADREPDWRCVTGDCDGGGSVCGLKRETWEWIGGSGASTVSDWSLICGDKFKVGLVQSVFFAGCMIGAGVFGHLSDSSLGRKGSLTVVCALNAIFGCLTAFSPNYWIYVFLRLLTGFSSGGVGLCAFVLATEPIGPSKRGTSGMSTFYFFSGGIAILSGIAYTFQTWRLLYIATSIPSLLYIALVLPFVSESPRWYLVRGRVKEATMLMSTIASFNGKHLPEGVHLAIDEEVSKSKATNDHEFSSIVENKDAQIGSILDVIRYPVTRIRLILAVALNFLGSVVYYGLSLNVANLETNLYMNVLLNAVAEMPAFTITAVLLDRFGRKPLTIGTMWFSGFFCLMGSMMGGMGVWKVIKMVCGVLGIFGMAGTYNLLFIYTAELFPTVVRNVALGSTTQAAQMGAILAPFVVVLGGWLPFGVFAVCGIVGGMFAFNLPETMNMPLYDTFNGLEAGLA 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02117 521 ProSitePatterns Sugar transport proteins signature 2. 181 206 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car01g02117 521 Gene3D MFS general substrate transporter like domains 49 513 IPR036259 -
Car01g02117 521 Pfam Sugar (and other) transporter 116 510 IPR005828 GO:0016021|GO:0022857|GO:0055085
Car01g02117 521 ProSitePatterns Sugar transport proteins signature 1. 383 399 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car01g02117 521 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 30 519 - -
Car01g02117 521 MobiDBLite consensus disorder prediction 1 22 - -
Car01g02117 521 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 30 519 - -
Car01g02117 521 SUPERFAMILY MFS general substrate transporter 116 509 IPR036259 -
Car01g02117 521 ProSiteProfiles Major facilitator superfamily (MFS) profile. 48 506 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02117 Car-Chr1 46754936 46761837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02117 7 517 Organic Solute Cotransporters AT3G20660 68.750 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02117 K08202 - gmx:100818415 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02117 01 46754936 46761837 Car06g01894 06 18901132 18901452 PCT