Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02107 ATGGAATTAGATTTTGGCATGGACTTTGAGGATTATTTTCCATCCATGATTACACGTTTAGGGGCAGAAGGGTTTATAGGTGAACTTTGCAATGGGTTTCGTTTGCTTATGGATGTGAACAAAGGTGTTATAACATTTGAGAGCTTGAAGATGAATTGTTTCATGCTTGGTTTAGAAGTGAGGGATGATGAGCTTGTTTGCATGCTAATGGAGGGTGATTTGGATGGAGATGGTGCTTTAAATCAAATGGAGTTTTGCATTCTCATGTTTAGGTTGAGTCCATGTTTGATGGATGGACCTAAAATGTGCACCCATCAAGGTGTGGATCCTATATTAATGTGA 342 0.3889 MELDFGMDFEDYFPSMITRLGAEGFIGELCNGFRLLMDVNKGVITFESLKMNCFMLGLEVRDDELVCMLMEGDLDGDGALNQMEFCILMFRLSPCLMDGPKMCTHQGVDPILM 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02107 113 PANTHER CALCIUM-BINDING PROTEIN KIC 5 105 IPR044205 GO:0005509
Car01g02107 113 Pfam EF-hand domain pair 41 91 IPR002048 GO:0005509
Car01g02107 113 PANTHER CALCIUM-BINDING PROTEIN PBP1-LIKE 5 105 - -
Car01g02107 113 ProSitePatterns EF-hand calcium-binding domain. 73 85 IPR018247 -
Car01g02107 113 Gene3D - 7 108 - -
Car01g02107 113 SUPERFAMILY EF-hand 7 89 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02107 Car-Chr1 46553763 46554559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02107 8 101 EF-hand Containing Proteins AT4G27280 61.458 2.94e-34 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02107 K24345 - gmx:100794479 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02107 01 46553763 46554559 Car01g02107 01 46553763 46554559 ECH