Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02105 ATGATGAGCAACCTATTCCTAAAGCCCCAAATTCATCTTCTTTCCTTTCCATCACAACTCCTCTTCCCTCACACTCTCAACAAACTCAATAAACCTTCTATTCTTCCCTTTATTCCCATCACAACAACATTCTCAACCCCACACTTTTCCACCACAACCACATCACTCTCCTACGGACCCTCCCTCCACAAAGGCAccaacccttcccaatcccaatctcaattccCTCAAAACGACGTCGTTCTACACGAAGAAACTTTCACTAGAGTTTTCGACCTCGCTGCACTTCGCGTCCCTTCCGCCGAATGCTCCGCTCTCGAAAGCCGCCTCCGTGGTCACCTTCTTAACTGGCCTCGCGTTCGTAACATTGCTCGTGTTCCCGGTGATGACATTGACCCTAATATCGCTCCTCTCTTAGGTCACCAAATTAACGGTAACAGCGACGAGGAAGAAGAAGGAGGAAAATCTCTCGTTTCGTTGCAACGGCGTGTTAACGGAAAATCGGAAGACGACGACGGTGACGATTTGACCCCTGTGCTGTATCGCGATAAGCTTGCTAAAACGTTCAACTCTCGCGGATTCGTGAAATTTCGGAATCTAGCGAAGATTTCGAGGCCGAATAGGAATAAGAAGAAGGAGAAGGAGGGGGAGGGTAAATTTGTTGAAGTTGAAGGGAATAAGCGCGTTGGGAGGACTGGTTTTGTTGTGGTTGAGGTTGTTGAAGAAGAACAAGGAGGTGTTGATGAGGGTTTTAGGAACTTGCTTGGTGAAGAATTTGGGAATGGCAAGTGGAGGGGATCGACGAGGTTGTTGCTGCTCGATGAACGCTATGCGGATGGAGATGTGGAGGCGTTGCCTGAGGCGATAAAGGCTGTCTTGAAGGAGTATGCAGAAAAAAGCACCACTTTGACTTTTGAGCTAGTGAGATGCAAGTTGACACTGTTTTATGATTACTGGCAGATGAATGAGATCTTGGAGGCCTTGCTGCCTGAGGGTGTGATTGTTCCATCAGCTTTCGAGACTGTTGGTCATATTGCGCACTTGAATTTGAAAGAGGAACATTTACCATACAAGAAGCTTATAGCAAAGGTTGTGCTGGATAAAAATAAGCCAAAGATAAAAACAGTTGTGAACAAGATTGACTCCATTCATAATGAGTACAGGACCATGCAGCTTGAAGTTTTAGCAGGAAACCACTCTCTTGTGACTACATTAGTTGAGAATGGACTTCGCTTTCATTTTGACTTAGCAACAGTATATTGGAGCTCTAGGCTTGCAACTGAAAGACAAAGGCTTCTGAGCGGTTTTACACAGAAAGATGTTGTCTGTGATGTTTTCTCTGGAGTTGGTCCACTTGCCATATCTGCAGCAAAGATAGTTAAGTGTGTTTTTGCTAATGACTTGAACCCATATGCAGTGGAGTATCTGGAAAGAAATAGTGTTCTAAACAAACTCGAGAGGAAGGTTAAGATCTTTAACATGGATGGAAGAAGGTTTATTAAGGCCATGTTTGCCAGTAATAAAGCTCATTCCATTACACAAGTGGTTATGAACTTGCCAAATGAAGCCGCAGAATTTCTAGATGCATTTCGGGGAATATACAAAGATATTCCTAAGAATGGGGAATTCACTTTTCCAACAATCCATGTTTATGGATTCTCCAAAGCCGAAGATCCAGAATTTGATTTTCATGAGAGAATAAGAATTGCGTTGCTTGAAGTGGCAGTCAATGTAGACATGCGACGGGTACGACCTGTTGCACCTGGAAAATGGATGTTGTGCGCATCATTTGTTCTCCCTAAAAGTGTAGCATTTGCTAATACTGCAGTTGATGCCTAA 1839 0.4323 MMSNLFLKPQIHLLSFPSQLLFPHTLNKLNKPSILPFIPITTTFSTPHFSTTTTSLSYGPSLHKGTNPSQSQSQFPQNDVVLHEETFTRVFDLAALRVPSAECSALESRLRGHLLNWPRVRNIARVPGDDIDPNIAPLLGHQINGNSDEEEEGGKSLVSLQRRVNGKSEDDDGDDLTPVLYRDKLAKTFNSRGFVKFRNLAKISRPNRNKKKEKEGEGKFVEVEGNKRVGRTGFVVVEVVEEEQGGVDEGFRNLLGEEFGNGKWRGSTRLLLLDERYADGDVEALPEAIKAVLKEYAEKSTTLTFELVRCKLTLFYDYWQMNEILEALLPEGVIVPSAFETVGHIAHLNLKEEHLPYKKLIAKVVLDKNKPKIKTVVNKIDSIHNEYRTMQLEVLAGNHSLVTTLVENGLRFHFDLATVYWSSRLATERQRLLSGFTQKDVVCDVFSGVGPLAISAAKIVKCVFANDLNPYAVEYLERNSVLNKLERKVKIFNMDGRRFIKAMFASNKAHSITQVVMNLPNEAAEFLDAFRGIYKDIPKNGEFTFPTIHVYGFSKAEDPEFDFHERIRIALLEVAVNVDMRRVRPVAPGKWMLCASFVLPKSVAFANTAVDA 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02105 612 PANTHER TRNA METHYLTRANSFERASE 39 609 - -
Car01g02105 612 CDD AdoMet_MTases 442 550 - -
Car01g02105 612 Pfam Met-10+ like-protein 338 536 IPR030382 -
Car01g02105 612 ProSiteProfiles SAM-dependent methyltransferase TRM5/TYW2-type domain profile. 339 601 IPR030382 -
Car01g02105 612 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 335 601 IPR029063 -
Car01g02105 612 PANTHER TRNA (GUANINE(37)-N1)-METHYLTRANSFERASE 2 39 609 - -
Car01g02105 612 Gene3D - 320 398 - -
Car01g02105 612 Gene3D Vaccinia Virus protein VP39 402 599 IPR029063 -
Car01g02105 612 Hamap tRNA (guanine(37)-N1)-methyltransferase [TRMT5]. 79 601 IPR025792 GO:0009019|GO:0030488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02105 Car-Chr1 46511673 46523648 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02105 K15429 - gmx:100797627 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02105 01 46511673 46523648 Car01g02105 01 46511673 46523648 ECH