Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02099 ATGGCCATCGCCTGCCACCAGAAACCGACCTCCGACGCAAACCTCTTCCGTCTCTGTCCCTTTTGGAGTTCCGGAAACGCACATAATCAAAACGAAGGAAACGCTCAAAAGTCCTCTAAAACGGTGTCGTCTGTCGCAAGGTCGTTGTTACCTCATCGGCGTAGACTCCGTCTCGACCCTTCCAATCATCTCTACTTTCCATATGAACCTGGTAAGCAGGTTAGAAGTGCTGTTCGATTAAAAAACAGTAGCAAGTCTTGTGTTGCTTTTAAGTTTCAAACTACGGCACCAAAAAGTTGTTACATGCGACCTCCTGGTGGTATTCTTGCTCCTGGAGAAAGCTTGATTGCAACCGTGTTTAAGTTTGTGGAACAACCTGAAAACAATGAAAAGTTGTCAGACCAGAAGAACAGGGTCAAGTTCAAAATCATGAGTCTCAAAGTGAATGAAGGGGTAGACTATGTGCCTGAGCTGTTTGATGAACAAAAGGATCTAGTTACAGTGGAACGAATCTTGGGGGTTGTGTTTTTAGATCCAGAACGGCCAAGTTCTGCGTTGGAAAAACTGAAAAGACAGTTGGCTGAAGCTGATACTGCACTTGAAACTCGGAAGAAGCCTCCTGCGGAGACAGGTCCTCGAGCAGTTGCTGAAGGTCTTGTCATTGATGAATGGAAAGAAAGACGGGAAAAGTACCTGGCCCGGCAGCAAGTTCAAGCAGTAGATTCAGTGTAA 732 0.459 MAIACHQKPTSDANLFRLCPFWSSGNAHNQNEGNAQKSSKTVSSVARSLLPHRRRLRLDPSNHLYFPYEPGKQVRSAVRLKNSSKSCVAFKFQTTAPKSCYMRPPGGILAPGESLIATVFKFVEQPENNEKLSDQKNRVKFKIMSLKVNEGVDYVPELFDEQKDLVTVERILGVVFLDPERPSSALEKLKRQLAEADTALETRKKPPAETGPRAVAEGLVIDEWKERREKYLARQQVQAVDSV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02099 243 Gene3D Immunoglobulins 50 181 IPR013783 -
Car01g02099 243 ProSiteProfiles Major sperm protein (MSP) domain profile. 55 177 IPR000535 -
Car01g02099 243 PANTHER VESICLE-ASSOCIATED PROTEIN 4-1 26 242 - -
Car01g02099 243 SUPERFAMILY PapD-like 44 187 IPR008962 -
Car01g02099 243 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 26 242 IPR016763 GO:0005789
Car01g02099 243 Pfam MSP (Major sperm protein) domain 56 163 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02099 Car-Chr1 46458729 46463032 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02099 - - gmx:100792909 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02099 01 46458729 46463032 Car01g02099 01 46458729 46463032 ECH