Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02076 ATGCAAGGTTCTATGGCAATGAGGAGATTTTTAACCAATCATAAGAGAACTACACAAATGATGGCAAAACATATGATGGAGCCATGTGATGTGTTCTTAAACCATAGAAGCACCGACACAAAAAGAACATTAGCAACACTTCTTTATGACCACCTTAAAAGACAAGGTTTCAATCCTTTCTTGGATGAGAAAAACATGAAGCCAGGGGACAAATTGTTTGAGAAGATAAACCGTGGTGTTTTGGAGTGTAAGATTGGTGTGGCGGTTTTCTCACCTCGTTATTGTGAGTCTTATTTTTGTCTCCATGAGCTTGCACTTTTAATGGCATGTAAGAAGAAGGTGATTCCAATCTTTTGTGATGTTAAGCCTTCTCAATTGCATGTTGTTAATAATGCTAATTGGTCGTTGGAGGAACTTAGGAGATTCAAATGGGCTCTTGAAGAGGCTAAGTATACCGTTGGACTCACCTTCAATTCCTCAAAAGGGAACTTTTCTGAAATTGTGACTAATGCTTCTGACATAATCCATGGAAGCATGATAGAACTTCAGAATGAAGAGCAGAAGAAGCATAAGCACTTGCCAATTCCTGCTTAG 594 0.3872 MQGSMAMRRFLTNHKRTTQMMAKHMMEPCDVFLNHRSTDTKRTLATLLYDHLKRQGFNPFLDEKNMKPGDKLFEKINRGVLECKIGVAVFSPRYCESYFCLHELALLMACKKKVIPIFCDVKPSQLHVVNNANWSLEELRRFKWALEEAKYTVGLTFNSSKGNFSEIVTNASDIIHGSMIELQNEEQKKHKHLPIPA 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02076 197 ProSiteProfiles TIR domain profile. 27 150 IPR000157 GO:0007165
Car01g02076 197 SUPERFAMILY Toll/Interleukin receptor TIR domain 29 150 IPR035897 -
Car01g02076 197 Pfam TIR domain 30 145 IPR000157 GO:0007165
Car01g02076 197 PANTHER COP1-INTERACTING PROTEIN-RELATED 20 190 - -
Car01g02076 197 PANTHER TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN 20 190 - -
Car01g02076 197 SMART till_3 28 161 IPR000157 GO:0007165
Car01g02076 197 Gene3D - 4 153 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02076 Car-Chr1 46156642 46158559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02076 31 189 Miscellaneous Gene Families AT1G57670 31.638 8.16e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02076 - - ccaj:109788850 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02076 01 46156642 46158559 Car01g02076 01 46156642 46158559 ECH