Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02063 ATGGCGAAGAAGAAGCAAAGAAACGTTAACGTCTCCGGAAAACCAAAGCACTCTCTCGACGTCAACCGCAGCAATGCCGATAAGACCGAATTCCGTTCCGCCGCCAAAGTTCGCCGTCTCAAGATGTACGAAACCAAACCCGTTCGCAATCGTAAGGGGAAAGTCGTATTCAACGCGTTTCAGTCCAAGGATCTTCCCAATACTCGAATCCGACCCGATCGTAACTGGTtcaTAAATGTTCATACCGAGACTCAGGAAAAGATTCAGTGTTTCCGAGAAGCAATGGAGAAGCATAATTCGAGTAATTATAATGTTATTATCAAGGGGAAGAAGCTGCCGATGTCGCTTCTCAAAGATAACCAGAAGCAATCTAGGTTTCACGTTCTTGATAGAGAGCCTTTTGAAGATGCATTTGGACCTAAGACTAAAAGAAAGCGTCCAACCCTTGTGGCGCCTGATTATGAGTCTTTAGCTAAGAAAGCTGATGGTTCTCAAGATGCTTTTGAAGAGAAGTGTGTTTCTAGTGTGTCTGCAGAAGACAATGAAGCAGATGGATTTAGAGGTTTAGCGCGGCATAACATGTTTGATAAGGGTCAAAGCAAACGCATTTGGGGTGAACTCTACAAAGTTATAGATTCTTCAGATGTTGTTGTCCAGGTTATCGATGCAAGGGATCCACAAGGCACTAGATGTTACCATTTAGAGAAGCATCTGAAAGAAAATTGCAAGCACAAACACATGGTGCTTTTATTGAACAAGGTTGATTTAATTCCTGCTTGGGCAACAAAAGGATGGCTTAGAGTTTTGTCAAAAGAATATCCAACGCTAGCATTCCATGCAAGCATTAATAAGTCCTTTGGAAAGGGTTCACTTCTATCGGTTCTGAGACAATTTGCTAGATTGAGAAGCGATAAGCAATCCATATCTGTTGGTTTCGTTGGATATCCAAATGTTGGGAAGTCATCAGTGATCAATACACTGCGTACAAAGAATGTTTGCAAGGTTGCTCCAATTCCAGGGGAAACAAAAGTGTGGCAGTATATAACCCTTACAAAAAGGATCTTTTTGATTGATTGTCCAGGTGTTGTCTACCGCAACAACGACTCTGAAACAGATGTTGTGCTGAAGGGTGTGGTACGTGTAACAAACTTGAAAGATGCTGCTGACCATATAGGCGAGGTTTTGAAACGCGTGAAGAAGGAGCATTTGACAAGAGCTTATAAAATAAAAGAGTGGGATGATGATAATGACTTCCTACTTCAGCTTTGCAAATCATCTGGCAAACTTCTTAAGGGGGGTGAACCTGATCTGATGACTGCAGCAAAGATGATACTACATGACTGGCAGAGGGGTCAAATTCCCTTTTTTGTTCCTCCACCGCAGGATGACTTGTCCGAACCCGAGGAGCCTAATGTCAATGGCATAGATGTTGATGAGGCTGTTGATCGTTATCAGGCATCTGCTGCCTTTAAAGCTTTGCTGACGTTCTTTCGTCCCAGCAGCAAAGTGTTCCAGTTCAAGGAGATTTATTTAGCGAGAATGAGTTGA 1548 0.427 MAKKKQRNVNVSGKPKHSLDVNRSNADKTEFRSAAKVRRLKMYETKPVRNRKGKVVFNAFQSKDLPNTRIRPDRNWFINVHTETQEKIQCFREAMEKHNSSNYNVIIKGKKLPMSLLKDNQKQSRFHVLDREPFEDAFGPKTKRKRPTLVAPDYESLAKKADGSQDAFEEKCVSSVSAEDNEADGFRGLARHNMFDKGQSKRIWGELYKVIDSSDVVVQVIDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKVDLIPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLRSDKQSISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYRNNDSETDVVLKGVVRVTNLKDAADHIGEVLKRVKKEHLTRAYKIKEWDDDNDFLLQLCKSSGKLLKGGEPDLMTAAKMILHDWQRGQIPFFVPPPQDDLSEPEEPNVNGIDVDEAVDRYQASAAFKALLTFFRPSSKVFQFKEIYLARMS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02063 515 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 2 3 473 IPR024929 GO:0005730
Car01g02063 515 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 204 365 IPR030378 GO:0005525
Car01g02063 515 Gene3D - 194 364 IPR027417 -
Car01g02063 515 Pfam NGP1NT (NUC091) domain 42 166 IPR012971 -
Car01g02063 515 Pfam 50S ribosome-binding GTPase 310 400 IPR006073 GO:0005525
Car01g02063 515 CDD NGP_1 206 362 - -
Car01g02063 515 PANTHER GTP-BINDING PROTEIN-RELATED 3 473 - -
Car01g02063 515 MobiDBLite consensus disorder prediction 1 27 - -
Car01g02063 515 PRINTS GTP1/OBG GTP-binding protein family signature 356 371 IPR006073 GO:0005525
Car01g02063 515 PRINTS GTP1/OBG GTP-binding protein family signature 310 330 IPR006073 GO:0005525
Car01g02063 515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 438 IPR027417 -
Car01g02063 515 Gene3D - 365 457 IPR023179 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02063 Car-Chr1 45968325 45973475 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02063 K14537 - gmx:100788649 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02063 01 45968325 45973475 Car01g02063 01 45968325 45973475 ECH