Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02057 ATGGCTACCGTGCAACTCCAATCCTTTTCCCTCATTCGCTCTCCCGAACCCCCCCCCCCCTCCCGCCGTACCACTGTCAGGTTACCTCACTACACCGGCCTCAAGCTCCGACCCTTCGCCGCCACTCGTTTACGGAGTCAATCCGCCTCTAGACTCGTTCGTCGCGGCGGTAGCGTCGTCTGTGAGGCTCGAGATACTGCCGTTGAAGTGGTTTCTATTATTGATGCAAATTGGCAATCCCTTGTCCTCGAATCTGATGTTCCTGTGTTGGTCGAATTCTGGGCTCCATGGTGTGGTCCTTGCCGTATGATTCATCCCATAATTGACGAGTTGGCAAAGGAATATGCGGGTAAGCTCAAGTGTTACAAAGTCAATACCGAGGAGAGTCCTACAACTGCTGCTCGGTATGGTATTCGAAGTATTCCAACTGTCGTTTTCTTCAAGAATGGTGAAAAGAAAGAAGCAATTATCGGTGCTGTGCCCAAGGCAACATTGACCTCAAGTATAGAAAAATTCCTGTGA 522 0.5038 MATVQLQSFSLIRSPEPPPPSRRTTVRLPHYTGLKLRPFAATRLRSQSASRLVRRGGSVVCEARDTAVEVVSIIDANWQSLVLESDVPVLVEFWAPWCGPCRMIHPIIDELAKEYAGKLKCYKVNTEESPTTAARYGIRSIPTVVFFKNGEKKEAIIGAVPKATLTSSIEKFL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02057 173 PRINTS Thioredoxin family signature 89 97 - -
Car01g02057 173 PRINTS Thioredoxin family signature 97 106 - -
Car01g02057 173 PRINTS Thioredoxin family signature 137 148 - -
Car01g02057 173 SUPERFAMILY Thioredoxin-like 68 173 IPR036249 -
Car01g02057 173 Gene3D Glutaredoxin 69 173 - -
Car01g02057 173 PANTHER THIOREDOXIN M-TYPE PROTEIN 1 173 - -
Car01g02057 173 CDD TRX_family 76 170 - -
Car01g02057 173 ProSiteProfiles Thioredoxin domain profile. 30 173 IPR013766 -
Car01g02057 173 Pfam Thioredoxin 70 170 IPR013766 -
Car01g02057 173 TIGRFAM thioredoxin: thioredoxin 75 172 IPR005746 GO:0015035
Car01g02057 173 ProSitePatterns Thioredoxin family active site. 90 108 IPR017937 -
Car01g02057 173 PANTHER GEO12009P1 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02057 Car-Chr1 45922091 45925873 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02057 K03671 - gmx:100811845 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02057 01 45922091 45925873 Car01g02057 01 45922091 45925873 ECH