Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02056 ATGGAGGTTCAGCAAGAGAATCTGCCGATTCCGGAAACCATCGTCTACACCACTACCACTCCACTTTCACTCACCGCCGACGATTTCCCAGATTCTGACAACCACGATCAATGCTCCGTTTTTCGCAACGTAATTTCTCTCGACACACCCCAATGCGATTCCGTTTATTCCACCGCCCCTGATTTCTTCTCCCTCGATGTCGCTGACGAAGGCGAAGCCGAAGACCCCATCCCCGAGCCTGTCACGCCGGCTGAGCCGAAGACGCCAGCTCTTGCGCCTGAGCCGACGTTAGAGAGCGGTTGGTTTCGTGGGAATTGTAAATTCAGAAGCCCCATGCTTCAGCTCCATAAAGAGATAGTGGATTTTTGTGAATTTTTGTCACCTACTCCTGAAGAGAAAGCTAAACGTGACACGGCAATAGAATCTGTGTTTGCTGTTATAAAACATATATGGCCTCACTGCCAGGTTGAAGTTTTTGGGTCTTTCAGGACAGGGTTGTATCTTCCAACTAGTGATATCGATGTTGTGATTTTGAGATCAGGCTTACCAAATCCGCAGATTGGTTTGAATGCAATTTCTAGAGCATTGTCTCAAAGGAGCATGGCTAAAAAGATACAGGTTATTGGAAAGGCTCGTGTGCCAATTATTAAATTCGTTGAAAAGACGAGCAGTCTTTCCTTCGATATAAGTTTTGACATAGAGAATGGACCCAAGGCTGCTGAGTATATTCAGGAAGCAGTGGCTAATTGTCCACCACTACGGCCGTTGTGTTTGATATTGAAAGTATTTTTACAACAAAGAGAACTGAATGAGGTATATTCAGGTGGGATTGGTTCTTATGCTCTCCTTACCATGCTGATGGCAGTGTTACGGAATGTTCGTCAGAGCCAAACTTCTGCCGAGCACAACTTAGGGGTCCTTTTGGTACACTTTTTCGATTTTTATGGACGTAAATTGAATACCTCAGATGTTGGTGTGTCTTGTAATGGAGCAGGAACCTTCTTCCTAAAGAGTAATAAATTTATATCATTATTGACTAGAATTTTCTTCTGGCTGAATCAGACTCCAGATAATGACATTGGGAAGAACTCCTTCAATTACTTCCAGGTTAGGTCGGCATTTTTAATGGCTTTCACAACTTTGACAAACCCCAAGGTCATCCTGAACTTAGGACCTAACAGGAGCATACTTGGCACTATAATTAGACCAGACCCTGTCTTGATGGAACGTAAAGGGGGGTCTAATGGCGAGATGACTTTTAATAGTTTGCTTCCTGGTGCTGGTGAGCCTATACAACAGCAGTATGGAGAGCAAGATATGTTATGCAATTGGCAAAAATCTGCCTCTAAGGAGAATGGGAAGCCAAAGGAAAATGGGGATTCTCGGATGGTCAATAATAATGAGAATGGTTCTGTGACAGAAAATGGTGTACATAAGAAACATAAGAAAAAACGGGTTAAACAGATTAGGTCAGAGTCCAGCAGCTGA 1488 0.4368 MEVQQENLPIPETIVYTTTTPLSLTADDFPDSDNHDQCSVFRNVISLDTPQCDSVYSTAPDFFSLDVADEGEAEDPIPEPVTPAEPKTPALAPEPTLESGWFRGNCKFRSPMLQLHKEIVDFCEFLSPTPEEKAKRDTAIESVFAVIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILRSGLPNPQIGLNAISRALSQRSMAKKIQVIGKARVPIIKFVEKTSSLSFDISFDIENGPKAAEYIQEAVANCPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAVLRNVRQSQTSAEHNLGVLLVHFFDFYGRKLNTSDVGVSCNGAGTFFLKSNKFISLLTRIFFWLNQTPDNDIGKNSFNYFQVRSAFLMAFTTLTNPKVILNLGPNRSILGTIIRPDPVLMERKGGSNGEMTFNSLLPGAGEPIQQQYGEQDMLCNWQKSASKENGKPKENGDSRMVNNNENGSVTENGVHKKHKKKRVKQIRSESSS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02056 495 MobiDBLite consensus disorder prediction 459 473 - -
Car01g02056 495 Pfam Cid1 family poly A polymerase 303 340 IPR002058 -
Car01g02056 495 PANTHER POLY(A) RNA POLYMERASE 95 488 IPR045862 GO:0004652|GO:0031499|GO:0043631
Car01g02056 495 MobiDBLite consensus disorder prediction 70 95 - -
Car01g02056 495 Gene3D - 112 383 - -
Car01g02056 495 PANTHER INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATED 95 488 - -
Car01g02056 495 MobiDBLite consensus disorder prediction 446 495 - -
Car01g02056 495 SUPERFAMILY PAP/OAS1 substrate-binding domain 251 386 - -
Car01g02056 495 SUPERFAMILY Nucleotidyltransferase 109 263 IPR043519 -
Car01g02056 495 Gene3D Beta Polymerase, domain 2 128 236 IPR043519 -
Car01g02056 495 Pfam Nucleotidyltransferase domain 147 243 IPR002934 GO:0016779
Car01g02056 495 CDD NT_PAP_TUTase 135 245 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02056 K03514 - gmx:100811320 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02056 01 45915161 45920920 Car01g02056 01 45915161 45920920 ECH