Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02045 atgatgatgacgatgatgGGAATCTTAAACATGGAAAAGAAATGGTTATTTCCTTTAATTGTTACCTCTGCTTTTTGTATGCTTTTTCTAGCAACATCCTTTAACATGGGTCTTGTCTCTTCAATTCACTCCATCAATTCACTCTTCTTTTTTCTACCATCACACTCACATAGAAACCAAACCTCACTTGCTTTTGTGGAGAGAAAGATTTCTCCCGCCCCGGCTCCCAATAGGCCTTCGATCCCTCGGTTCGCTTATTTGATTTCCGGCTCCAAAGGTGACTTGGAGAAGCTTTGGAGAACTCTTCTTGCGCTTTACCATCCATTGAATCATTATGTTGTTCATTTAGACCTCGAGTCGCCGTTGGAGGAAAGATTGGAACTTGCTTCTAGAATTGAAAAACAGCATATTTTCAATGAGGTTGGGAATGTGTTTGCTATCACTAAAGCCAATATGGTTACTTACCGTGGACCGACGATGGTTGCGAATACTCTTCATGCTTGTGCTATTTTGCTTAAGAGAAGTAGAGATTGGGATTGGTTTATTAATCTTAGTGCTTCCGATTATCCTCTTGTTACTCAAGATGATCTACTATATACATTCTCAAGTTTAGATAGAAACCTTAACTTCATGGAGCACACGAGTCGGTTAGGATGGAAGTTGGATAAACGAGCAATGCCGTTAATAATAGACCCGGGGCTTTACGAGTCAAAGAAGTCTGATGTATTTTGGGTTAATCCTAAGCGAACTTTGCCAACTGCATTTAAACTATTCACTGGTTCAGCATGGATGGTTTTATCACATGAATTTGTGGAATTTGTTGTATGGGGTTGGGATAATCTCCCAAGAACCCTACTCATGTACTACACAAATTTTCTCTCTTCCCCGGAAGGCTACTTTCAAACTGTCGCGTGCAACGTGCCGGAATTATCGAAAACCCTTGTTAACAGTGACTTACATTATATTTCGTGGGACATCCCTCCTAAACAGCACCCTCACGTCCTTAACATAAACGACACGGAAAAAATGATTGCGAGTGGCGCCGCCTTTGCTAGAAAATTCATGCAAGACGATCCAGCCATGGACTTAATCGATAAAACATTACTACGTAGGAGAAATGGACTATTCTCTTTCGGTGGTTGGTGCTCCGGTAAACCAAAATGTACCGAGGTCGGGAACATTTATAAACTCAAACCCGGTCCAGGGTCTCAAAGGCTTCAACAACTTCTAGCCGGACTAACGTCGAAGGCTAAATCGGGTGAGGATCAGTGTACATAA 1278 0.4116 MMMTMMGILNMEKKWLFPLIVTSAFCMLFLATSFNMGLVSSIHSINSLFFFLPSHSHRNQTSLAFVERKISPAPAPNRPSIPRFAYLISGSKGDLEKLWRTLLALYHPLNHYVVHLDLESPLEERLELASRIEKQHIFNEVGNVFAITKANMVTYRGPTMVANTLHACAILLKRSRDWDWFINLSASDYPLVTQDDLLYTFSSLDRNLNFMEHTSRLGWKLDKRAMPLIIDPGLYESKKSDVFWVNPKRTLPTAFKLFTGSAWMVLSHEFVEFVVWGWDNLPRTLLMYYTNFLSSPEGYFQTVACNVPELSKTLVNSDLHYISWDIPPKQHPHVLNINDTEKMIASGAAFARKFMQDDPAMDLIDKTLLRRRNGLFSFGGWCSGKPKCTEVGNIYKLKPGPGSQRLQQLLAGLTSKAKSGEDQCT 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02045 425 PANTHER OS01G0201100 PROTEIN 9 424 - -
Car01g02045 425 Pfam Core-2/I-Branching enzyme 84 343 IPR003406 GO:0016020|GO:0016757
Car01g02045 425 PANTHER GLYCOSYLTRANSFERASE 9 424 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02045 Car-Chr1 45807954 45811688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02045 6 424 Glycosyltransferase AT3G15350 68.085 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02045 - - gmx:100792706 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02045 01 45807954 45811688 Car01g02045 01 45807954 45811688 ECH