Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02036 ATGGCAGCAGCGATTGGTTTGAACGGAGTAAAGGTGGGGACGACGTCGTCTCAGGCGTATCTGGAAGGGAAAGCAGTGAAGGAAACGAAAGCTCTGATGGCGGAACTTTGTCGCCACTTCTACAGTTTGGGATGGGTTTCAGGAACTGGTGGCAGCATCAGCATCAAAGTCCATGATGATTCCATTCCCAAACCTCAACAActcattctcatgtccccttctgCTGTTCAAAAAGAAAGAATGGAACCAGAAGATATGTATGTGATATCTCACGATGGGTCAGTTTTGTCTGCCCCATCTCCCAAACCTTACCCACATAAGCCTCCCAAGTGTACTGATTGTGATCCACTATTCATGAAGGCATATGAAAAGCGTGATGCTGGGGCTGTTATTCATAGTCATGGGGTAGAATCTTGTCTCGTAACAATGATCAATCCTTTTTCAAAGGAATTTCGAATTACTCACATGGAGATGATAAAAGGGATCAAGGGGCATGGTTATTATGATGAACTAGTGGTCCCCATAATCGATAACACGGCTCATGAACATCAACTCACTGAATCTTTTGCTAAAGCAATCGAAGACTACCCAAAAACAACAGCGGTGCTTGTTCGCAACCATGGGATATTTGTTTGGGGAGACTCATGGATCAGTGCTAAAACTCAGTCTGAGTGTTATCATTACCTCTTTGATGCTGCTATCAAACTTCATCAAATGGGATTGGACTGGTCGACTCCAAATCATGGTCCGATACAAAGTGCAAGAAGGGGTTTAAGTATTGCTGGGGAATCAAATCTGTCAGTAAAGGCAAGGAAAGATAATGGTGGCAGCGATCCATTTCCACGTTGTGTTGTTCTTGATATTGAAGGAACTACTACTCCCATATCATTTGTTTCAGAGGTTCTCTTCCCATATGCCCGCGATAATGTTGGGAGGCATCTTTCTGCAACATACGATACCTCTGAAACTAAAGCTGACATCAAGTTGCTACGATCCCAAGTTGAGAGTGACCTTGAGCAAGGGATTGCCAGTGCTGTACCTATCCCCTCAGATGATGCTGGGAAAGAGGAGGTTATTGCTGCTCTAGTTGCTAATGTGGATGCTATGATCAAAGCGGACAGAAAGATCACTGCATTAAAAGAGTTGCAGGGTCATATATGGCAAACTGGTTATGCAAATGATGAATTGGAGGGAATCGTTTTTGATGATGTACCCGAAGCTCTAGAAAAGTGGAATGCCTTGGGCATAAAGGTTGTCTTTACTGGTTATATTAGTTCTATACCTCTTTTCGTTTCCCTTGTTAACTTTTTTAAAGATTGTTGCTACCTTTTTCATGTATTTTAA 1344 0.4204 MAAAIGLNGVKVGTTSSQAYLEGKAVKETKALMAELCRHFYSLGWVSGTGGSISIKVHDDSIPKPQQLILMSPSAVQKERMEPEDMYVISHDGSVLSAPSPKPYPHKPPKCTDCDPLFMKAYEKRDAGAVIHSHGVESCLVTMINPFSKEFRITHMEMIKGIKGHGYYDELVVPIIDNTAHEHQLTESFAKAIEDYPKTTAVLVRNHGIFVWGDSWISAKTQSECYHYLFDAAIKLHQMGLDWSTPNHGPIQSARRGLSIAGESNLSVKARKDNGGSDPFPRCVVLDIEGTTTPISFVSEVLFPYARDNVGRHLSATYDTSETKADIKLLRSQVESDLEQGIASAVPIPSDDAGKEEVIAALVANVDAMIKADRKITALKELQGHIWQTGYANDELEGIVFDDVPEALEKWNALGIKVVFTGYISSIPLFVSLVNFFKDCCYLFHVF 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02036 447 Gene3D - 26 250 IPR036409 -
Car01g02036 447 Pfam Class II Aldolase and Adducin N-terminal domain 32 233 IPR001303 -
Car01g02036 447 SUPERFAMILY HAD-like 282 419 IPR036412 -
Car01g02036 447 Gene3D - 295 394 - -
Car01g02036 447 PANTHER BIFUNCTIONAL METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE/ENOLASE-PHOSPHATASE E1-RELATED 2 420 - -
Car01g02036 447 SUPERFAMILY AraD/HMP-PK domain-like 27 248 IPR036409 -
Car01g02036 447 SMART Aldolase_II_2 31 234 IPR001303 -
Car01g02036 447 TIGRFAM salvage_mtnB: methylthioribulose-1-phosphate dehydratase 33 238 IPR017714 GO:0005737|GO:0019509|GO:0046872
Car01g02036 447 Hamap Methylthioribulose-1-phosphate dehydratase [APIP]. 18 242 IPR027514 GO:0005737|GO:0019509|GO:0046872
Car01g02036 447 PANTHER METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE 2 420 IPR017714 GO:0005737|GO:0019509|GO:0046872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02036 K16054 - gmx:100796209 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02036 01 45636290 45645109 Car01g02036 01 45636290 45645109 ECH