Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02013 ATGGACACAGAAAAACACCATCATTCTTCAAAAACAAACAACAACAGTAGTAGCAGCACAAGTGAACTATTTGTTTGTTTCACTTCACGTTTATCTTCTTCATCCATGAAACTCTCATCAAAATCAATTTTAAGTCCAAGCCGTAGCAGAGAGCCACCACAGATATCACTCTCATCTTCCCTTAGTAGAAGACTAAGGAGCAATGGAAGCATGAAAGGTGGTCAAGCTTCACCAATGTTCCCAACAAGTGGGGGTGGTGGAAAGAAAAGAGGGTGTGGTTTTGAGAATCCAGAACCTTCATCACCAAAAGTTACTTGCATTGGACAAGTAAGAGTGAAGACAAAGAAACAAGGGAAGAAAATGAGGTCAAGATCAAAGAGAAGAGGTGAAGCTAGTTTTAGAAGAGGTGAGAGTCATCCAGATCTAACTAGACAGAATAGCCAAAGTGGTTTTTGTTATCAGAATCAACAGTGTTTGAAGCATAGGAATCAACAAAGATGGGTTCATTTGCCTTTAACAATATGTGAGGCCTTGAGAGAATTTAGTTGCTTTTTTCCTTGTAGGTCTTCTTGTATGTCAAGTGAGAAGGATAAAGAGGAAAAGGGTAGTTTAGAAGAGAGAGGATCTAGTGTTAGACATGGTAGAGAAGGTTCATGTGGAGCTGCATTTGCAAGATGGTTGGTGAGTTTGCAagatggagatgggaaaggaagggagattgaggttatgatggatgatgatgatgatgGAAGAGAGAAAGGTGGTGAGAGGAGTTTTAGTCAAAGGAGACATATTTTTGAAGACCTTGATATTgatgtggttgatgagaagattactactgaatttggagttgaagaaaatgaagatgaagatgaagatgagaaaggaagaGTTAGTATTTGTATTCCACCAAAGAATGCTCTTTTGTTGATGAGGTGTAGATCTGATCCTGTTAAAATGGCTGCTTTGGCTAATAGGTTTTGGGAATCACCTCTTCATAAAGAACATCAATTAGACCAGGAACATCATCAACATCaagacgtagaacaagaccacgaggatagtggaattcaagagaatgaacaacaacaagaacatgaacaagaagaagaagtagaagaagaagaagaaAGTTTCAAAGATCAAAACATTTACATGGAGCAAGTTGAAGAACTACAACAATTTGTAGTAGTGGAAGATAGCATTTGTGAAAGAGAAACACAAGCTCTTCTTGAAAGCTATGAAATTGAAAGCAAAACCAACCAAGAAGAAATTCATGAAGACACCAAAgaagaggaagagaaagttaatgaagatgaagatgctatcgatgatgataaagttgaaACCTTTTCATGTGTTTTACTTGATTCACATCATGCAGATCTTGAGAAGCAAGAAATAGAAGAGACCCACCAAGGAGAAGATGAAGAAAACAAAGAAAGTTTCGAACTTTCTTCATATTCTGAAACGTTGGTAGTTTCTTCAGAAGTAGAAAAGGACGAAGCTCTAAAAGAAGAAGAATCAGAAACAGCAGAGAAAGTTTCAACGGAAGAAGAAGAAGAGAAAGTGACTGAAGAGAAAGAATTGGATCCGACCCATCACGGATCCGACCCGGAAATTAGTCTTCATGGGTCAACGGAGCGAGAAAATGGGTCaaagaaagaagagagagaaagagaaagagaaaCGTTACCGGAATGCTTGTTGTTGATGATGTGTGAGCCGAAACTTTCAATGGAGGTGTCAAAGGAAACATGGGTATGTAGCACCGATTTCGTACGGTGGTTGCCGGAGAGACCCGCCGCCGGGAAAGTCGCCGGAGGGGAGAAGAGGGTCACCGTGAATTCTTCTTTGAAGCCGAAGGTGAAGGTGAAACCTGTTCAGCCGTTGATGCAGCCGGCGAGATCTTCTTGTTCTTTTCCGGTGACCGGAGGTGGCGCCGGCATGTCGATGGCGACGATGATAGAGCAGAAGTTGGTGGGGTGTTCCAAATCTCGTAATGGGTATGAGCCATTTGTTCTCACGCGCTGTAAGTCGGAGCCGATGAGGTCTGCGGCTAAGCTTGCGCCGGAGGCTTGTTTCTGGAACAATAGGAAGCTTGAGCCGCACCCTCCTCCGACTTCGCTTGGAATCGGCGCACCGGCTGGTGTTGGGttttga 2163 0.3657 MDTEKHHHSSKTNNNSSSSTSELFVCFTSRLSSSSMKLSSKSILSPSRSREPPQISLSSSLSRRLRSNGSMKGGQASPMFPTSGGGGKKRGCGFENPEPSSPKVTCIGQVRVKTKKQGKKMRSRSKRRGEASFRRGESHPDLTRQNSQSGFCYQNQQCLKHRNQQRWVHLPLTICEALREFSCFFPCRSSCMSSEKDKEEKGSLEERGSSVRHGREGSCGAAFARWLVSLQDGDGKGREIEVMMDDDDDGREKGGERSFSQRRHIFEDLDIDVVDEKITTEFGVEENEDEDEDEKGRVSICIPPKNALLLMRCRSDPVKMAALANRFWESPLHKEHQLDQEHHQHQDVEQDHEDSGIQENEQQQEHEQEEEVEEEEESFKDQNIYMEQVEELQQFVVVEDSICERETQALLESYEIESKTNQEEIHEDTKEEEEKVNEDEDAIDDDKVETFSCVLLDSHHADLEKQEIEETHQGEDEENKESFELSSYSETLVVSSEVEKDEALKEEESETAEKVSTEEEEEKVTEEKELDPTHHGSDPEISLHGSTERENGSKKEERERERETLPECLLLMMCEPKLSMEVSKETWVCSTDFVRWLPERPAAGKVAGGEKRVTVNSSLKPKVKVKPVQPLMQPARSSCSFPVTGGGAGMSMATMIEQKLVGCSKSRNGYEPFVLTRCKSEPMRSAAKLAPEACFWNNRKLEPHPPPTSLGIGAPAGVGF 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02013 720 MobiDBLite consensus disorder prediction 495 563 - -
Car01g02013 720 MobiDBLite consensus disorder prediction 12 77 - -
Car01g02013 720 Coils Coil 500 520 - -
Car01g02013 720 MobiDBLite consensus disorder prediction 196 216 - -
Car01g02013 720 PANTHER CHLOROPLAST PROTEIN HCF243 1 720 - -
Car01g02013 720 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 1 720 - -
Car01g02013 720 MobiDBLite consensus disorder prediction 196 213 - -
Car01g02013 720 MobiDBLite consensus disorder prediction 462 484 - -
Car01g02013 720 MobiDBLite consensus disorder prediction 335 363 - -
Car01g02013 720 MobiDBLite consensus disorder prediction 1 147 - -
Car01g02013 720 MobiDBLite consensus disorder prediction 414 446 - -
Car01g02013 720 MobiDBLite consensus disorder prediction 364 378 - -
Car01g02013 720 MobiDBLite consensus disorder prediction 462 563 - -
Car01g02013 720 Coils Coil 357 378 - -
Car01g02013 720 MobiDBLite consensus disorder prediction 417 432 - -
Car01g02013 720 MobiDBLite consensus disorder prediction 113 129 - -
Car01g02013 720 MobiDBLite consensus disorder prediction 335 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02013 Car-Chr1 45382692 45385364 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02013 - - cam:101508279 1158.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02013 01 45382692 45385364 Car01g02013 01 45382692 45385364 ECH