Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02009 ATGGAAATCGACGCGTTACCCATAACAGAATACGACAACAACAATGGCATCAACAATGGCATCGTCATACCGACCAAATCCACCCCCCGCCGCCGCAAGAGAAACGAGTACATGCACGAGGATGCTACACACCTGGCGGCGCGTAAAAAAAAGGAGATGAGAATTCGTTTATCGCTTACAAGACCTTCTTACGTTCTTGGACTCTCTCCCAAGCCTCTTAGATCGGAACATCGTCGGAGGTTGCGATATTTGCTTCGTAGGTTTGTTAATCAACATGATTGGGTTGGTGCTAGTGGTGTTCTTAGTGTCTATTTGAAAGGAACTGTTAATGATACTTCTCCTTTGAAGAATCGTTTCAAGTTTTGGGTTTTACTGGAGCTTCTTAAGCATGTGGAAAACCATTCTATCAGTTCAATTAATTCAACAAGGATCAGAAATCTCTATGATATTTGGTCAAAGAAAATTGGACCAATGAAGACTTGGCCTGTAGAGAGCAGATATGCGGTTCATTTGGAGTTCATGTTATTCTATCTTATGCAAGGCAATGCTGGAGATGCATATCAGCTTGCTCTATGCCTTGAACAAGAGAAAATTGATATTGATCCTGTTTCCAAGATAATGATGGGTTTGACATTCTATGAGCTTTGGTATTCTTCTATTCCCGAAGAATTTCAGTGGAGAGATTTAGATCAAATTGACTGTCAAGAGAACTCACATATGGAGGGAACCTCATTCAGCAATGAGGTTGGACAGTCAGAATGTCAAAATTCTCACATGGCACAGTCAGAACGTCAAATTACAGTTGAGTCTCACATGGCAGACACTCAATATCAATGTGACTCAGATGCATCTGTCATGAATGAAAGGAAAATTTCTAAGGGTATTGTCGTCAGTAAAGATATGAGAGTTTCCATGGAAGTTGATACTAGCCATAAAAGAGGAAAATCACGTCAGATCTTTCAGTCGGAAGGCTTTTACTTGATTTCTGATGAACATAAAGAAACAGATAATCCTTTTTCTAACAGTGAAGATCTTACACAAGATACCTTGTATGCTCTTGGGAAACTTGATTTGTGGTTGTTACCATTGTGTTTTTCGGGTGAGAACAATTTGGAGGAGTTCATGGACATGCACAGAAATCAGCACAGTGACTACTATAAAAATGCAGTGAAGTATTTACAACTAGCGCTCAACTCAACATCCTTTGCATCTGTAGCATTACTTCCATTGACACAGCTGCTGCTGATCGGAGGTCAAGTTAACGAGGTTCTGACCATGCTTGAGCAACAATGCTATAATTCACACTCTGTACTCCCAATTAGATTACGGGCTATTCTCTTGGAGCGTTTTGATCGAAACAACTCTCTCTTGATTTGTAGCTGTTTTGAGGAGATATTAAAGAAGGATCCAGCATGTCGTGATTCTTTAGCAAAACTCATAATGATGCACCAAACAGGCGACTATAATCTTGAATCTCTTGTGGAAATGATTGCTTTACATTTGGATGCTACAGATGCTGAGTACAATACATGGAGGGTCTTCTCTTTATGTTTTTCTAAATTGTCTCTCCTTGAAGAAGACTGCATGTCTGCATGCTCCATTCGAAATGAGGATAGACAGGAGCAACTTCGCTCCTTACGCAAAACCCCAAAAATATTTACAGAGGGCATATCAGGAAAATCTTGGAATATTCGGTGTCGGTGGTGGCTAACAAGATATTTCAGCAATAGCAAGTTTGAATCAAGTATTGGAACTGGTGATTTACAGTTACTCACATACAAAGCAGCATGTGCATCCTACATGTATGGACGAGAGTTCAGCTATGTTATGAAGGCCTATTCTCATTTAGAAAAAGAAAATGATATGGATTTATTGCTATTCTTGGATGAGCACAAGAGAAATTCATATAGAATTTATGAAAAATTTCAAACAAAACTACATGGATAA 1947 0.3934 MEIDALPITEYDNNNGINNGIVIPTKSTPRRRKRNEYMHEDATHLAARKKKEMRIRLSLTRPSYVLGLSPKPLRSEHRRRLRYLLRRFVNQHDWVGASGVLSVYLKGTVNDTSPLKNRFKFWVLLELLKHVENHSISSINSTRIRNLYDIWSKKIGPMKTWPVESRYAVHLEFMLFYLMQGNAGDAYQLALCLEQEKIDIDPVSKIMMGLTFYELWYSSIPEEFQWRDLDQIDCQENSHMEGTSFSNEVGQSECQNSHMAQSERQITVESHMADTQYQCDSDASVMNERKISKGIVVSKDMRVSMEVDTSHKRGKSRQIFQSEGFYLISDEHKETDNPFSNSEDLTQDTLYALGKLDLWLLPLCFSGENNLEEFMDMHRNQHSDYYKNAVKYLQLALNSTSFASVALLPLTQLLLIGGQVNEVLTMLEQQCYNSHSVLPIRLRAILLERFDRNNSLLICSCFEEILKKDPACRDSLAKLIMMHQTGDYNLESLVEMIALHLDATDAEYNTWRVFSLCFSKLSLLEEDCMSACSIRNEDRQEQLRSLRKTPKIFTEGISGKSWNIRCRWWLTRYFSNSKFESSIGTGDLQLLTYKAACASYMYGREFSYVMKAYSHLEKENDMDLLLFLDEHKRNSYRIYEKFQTKLHG 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02009 648 Pfam TAF RNA Polymerase I subunit A 89 614 IPR039495 GO:0000120|GO:0006360
Car01g02009 648 PANTHER TAF RNA POLYMERASE I SUBUNIT A 26 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02009 Car-Chr1 45290898 45300398 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02009 - - cam:101507338 1283.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02009 01 45290898 45300398 Car01g02009 01 45290898 45300398 ECH