Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01991 aTGGCGTTGCGTCACATAGGATTCTTCCCTCACACACTCGTTGCTTCTACAAACTTCACTCCAAAACCGAAACTCAACCATAACCGTTTTTTCTTTTCTCCTTCACACTCTTTTTCTTCCACCGTCACTGTAATGGCTTCAAATGCTCGTAAAGTCCTAATTCCGATCGCTGATGGCACCGAGCCTATGGAGGCCGTCATCACCATCGATGTTCTCCGTCGATCCGGAGCTGACGTCACCGTTGCGTCCGCCGCCGACAGTCTTTCCGTTCAAGCTCTTCACGGCGTCAAGATCATTGCTGATGCTTCTGTTTCCGACGTTGCCAACACTGCTTTCGACTTAATCGCTCTCCCTGGAGGGGTTCCGGGTGTGGACAATCTTAGAGACTGTGGAGTGTTGGAAGGGTTGGTAAAGAAGCATGTTGAGGATGGAAAGCTTTATGCCGCGGTGTGTGCTGCTCCTGCAGTGGTACTTGGGCAATGGGGTTTGCTGAATGGATTGAAGGCAACTTGTCACCCTTCATTCATGGAAAAATTGGCCTCCTATGCCACTTCTGTTGAGTCAAGGGTGCAGCTGGATGGCAGAGTTGTGACCAGCCGTGCACCTGGTACCACCATGGAGTTTGCCATTGCTCTGGTTGAGCAACTACTTGGAAAGGAGAAAGCTGATGAAGTTGCAGGTCCACTGGTTATCCGATCTAATCATGGTGATGAATATACTTTTTTGGAGCTAAACCCAGTGCAATGGACATTTGACAGTCCACCCAAGATTCTTGTACCAATTGCTAATGGCACAGAAGAAATGGAAGCTTTGATTATAATCGATATTCTGCGAAGAGCAAAGGCAAATGTTGTGGTTGCTTCTGTTGAGGACAAACTAGAGATCTTGGCATCACGTAATGTTAAACTGAAGGCAGACACACTCCTTGATGAAGCAGTTAAACTTTCATATGACCTGATTGTGTTGCCTGGTGGAATTGGTGGTGCCCAAGCTTTTGCAAACTCGGAAACCTTGGTGAATTTGTTGAAAAAGCAAAGAGAATCAAACAGATATTATGGAGCAATTTGTGCATCCCCGGCTTTAGTTTTGGAGCCCCATGGCTTACTAAAGGGTAAAAAGGCCACTGCTTTTCCTGCCATGTGCAACAAGTTATCAGATCAGAGTGAAGTAGAAAACAGGGTTGTAGTTGATGGGAACCTCATTACTAGCAGAGGCCCAGGAACCTCCATTGAGTTTGCACTAGTTATTGTGGAGAAGCTGTTTGGACGCAAGTTAGCTCTAGAACTTGCAAAGACAATAGTATTTACACGCTCATGA 1317 0.4639 MALRHIGFFPHTLVASTNFTPKPKLNHNRFFFSPSHSFSSTVTVMASNARKVLIPIADGTEPMEAVITIDVLRRSGADVTVASAADSLSVQALHGVKIIADASVSDVANTAFDLIALPGGVPGVDNLRDCGVLEGLVKKHVEDGKLYAAVCAAPAVVLGQWGLLNGLKATCHPSFMEKLASYATSVESRVQLDGRVVTSRAPGTTMEFAIALVEQLLGKEKADEVAGPLVIRSNHGDEYTFLELNPVQWTFDSPPKILVPIANGTEEMEALIIIDILRRAKANVVVASVEDKLEILASRNVKLKADTLLDEAVKLSYDLIVLPGGIGGAQAFANSETLVNLLKKQRESNRYYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEVENRVVVDGNLITSRGPGTSIEFALVIVEKLFGRKLALELAKTIVFTRS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01991 438 PANTHER BNAA06G01020D PROTEIN 46 433 - -
Car01g01991 438 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 46 433 - -
Car01g01991 438 Pfam DJ-1/PfpI family 50 215 IPR002818 -
Car01g01991 438 Pfam DJ-1/PfpI family 256 418 IPR002818 -
Car01g01991 438 Gene3D - 251 438 IPR029062 -
Car01g01991 438 Gene3D - 43 243 IPR029062 -
Car01g01991 438 CDD GATase1_DJ-1 52 216 - -
Car01g01991 438 SUPERFAMILY Class I glutamine amidotransferase-like 50 232 IPR029062 -
Car01g01991 438 Coils Coil 286 306 - -
Car01g01991 438 SUPERFAMILY Class I glutamine amidotransferase-like 254 435 IPR029062 -
Car01g01991 438 TIGRFAM not_thiJ: DJ-1 family protein 256 431 IPR006287 -
Car01g01991 438 TIGRFAM not_thiJ: DJ-1 family protein 51 227 IPR006287 -
Car01g01991 438 CDD GATase1_DJ-1 257 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01991 Car-Chr1 45057300 45061930 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01991 K03152 - gmx:100803116 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01991 01 45057300 45061930 Car01g01991 01 45057300 45061930 ECH