Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01979 ATGACATTCTTACTTCACCTCAAAACCACATTTCTCACTTTATTATTCTTGTCATTCTCAACCTTCATTGCTCATTCCCTAGTTCCACAAAATGAAACCTTCAAATTTGTAAATTCAGGTGAACTAGGACCATTCATAGTAGAATATGGAGCTGATTATAGAATGATAAGCATATTCAATTCTCCATTCCAAGTTGGTTTCTACAATACAACTCCAAATGCATTCACTCTAGCCCTTCGAATCGGGCTTCAACGATCCGAACAACTTTTTCGATGGGTTTGGGAAGCAAATAGAGGCAACCCAGTTGGTGAAAATGCAACATTTTCATTAGGTGTTGATGGAAATCTTGTGTTGGCTAATGAAGATGGTAGAATTGTTTGGCAAACCAACACTTCTAATAAAGGTGTTGTTGCCTTTAGGTTGTTGTCAAATGGTAACATTGTTTTAATTGATTCTAAAGGTAATTTTGTTTGGCAAAGTTTTGACCATCCTACAGATACCCTTTTGGTGGATCAATATTTAAAGCCTAATGGGCCTTCAAAACTTATTAGTAGGCTTTCAGAAAAGGAAAATTTAAATGGGCCATATAGTTTGGTTTTGGAGCCCAAAGGGTTGGCTTTGTATTACAAAAGTCAAAATTCACCTAGGCCAATTCTTTATTGGTTTTCATCTGATTGGTTTTCAATTGAAAAGGGGTCATTGGAAAATGTCACACTCAAATCTGATTTAGACACTTTTGAGATTGGATTTGATTTTTTTGTTGCCAATTCTTCAACTTTTGGTAATAGAATTATTGGTAGGCCAGTGAATAATAGTACCTTGACATATCTTAGACTTGGAATTGATGGTAACATTAAATTTCACACTTATTTCTTAGATGTACGTGATGGTGTTTGGCAAGTGACATACACTCTCTTTGATAGAGATTTTGACGAGAGTGAGTGTCAATTGCCACAAAGATGTGGAAAATTTGGGCTTTGTGAGGAAAATCAATGTGTTGGTTGTCCATTAGAAAATGGAATATTTGGGTGGAGCAATAAATGTAGTGCTAAGCCTATAGCAACATGCAAAGAAAGTGAATTTCATTACTACAAAATTGAAGGAGTTGAGCATTATATGAGCAAATACACTAATGGTGATAGTGTAAGTGAAGCTAATTGTGGAAATAAATGTACCAAAGATTGCAAGTGTGTAGGGTATTTCTACCATAAGGATAAGTCAAGGTGTTGGATAGCTTATGATCTACAAACTCTTACTAGAGTGCCAAATACTACACATGTGGGTTTTATTAAGGTGCCTAATAAGTAA 1308 0.3524 MTFLLHLKTTFLTLLFLSFSTFIAHSLVPQNETFKFVNSGELGPFIVEYGADYRMISIFNSPFQVGFYNTTPNAFTLALRIGLQRSEQLFRWVWEANRGNPVGENATFSLGVDGNLVLANEDGRIVWQTNTSNKGVVAFRLLSNGNIVLIDSKGNFVWQSFDHPTDTLLVDQYLKPNGPSKLISRLSEKENLNGPYSLVLEPKGLALYYKSQNSPRPILYWFSSDWFSIEKGSLENVTLKSDLDTFEIGFDFFVANSSTFGNRIIGRPVNNSTLTYLRLGIDGNIKFHTYFLDVRDGVWQVTYTLFDRDFDESECQLPQRCGKFGLCEENQCVGCPLENGIFGWSNKCSAKPIATCKESEFHYYKIEGVEHYMSKYTNGDSVSEANCGNKCTKDCKCVGYFYHKDKSRCWIAYDLQTLTRVPNTTHVGFIKVPNK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01979 435 PANTHER - 12 435 - -
Car01g01979 435 Pfam D-mannose binding lectin 93 177 IPR001480 -
Car01g01979 435 CDD PAN_AP_plant 355 433 - -
Car01g01979 435 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 226 IPR036426 -
Car01g01979 435 PIRSF SLG 1 435 IPR035446 -
Car01g01979 435 PANTHER SECRETED GLYCOPROTEIN EP1, PUTATIVE-RELATED 12 435 - -
Car01g01979 435 Gene3D - 55 162 IPR036426 -
Car01g01979 435 CDD B_lectin 47 164 IPR001480 -
Car01g01979 435 ProSiteProfiles Bulb-type lectin domain profile. 31 162 IPR001480 -
Car01g01979 435 SMART blect_4 47 164 IPR001480 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01979 - - gmx:100804561 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01979 01 44871927 44873552 Car01g01979 01 44871927 44873552 ECH