Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01956 ATGTCATACAAAGTCCTATTGTTTCTCTACCTTATTGCAATCTTCCAATGCTACTCAGAAATCCTCCTCCCAAGTCAACTCCACCGTGACTTGCTTATCTCGTCACCGGTAAATTGCCCCGCCCCCAATCCAAACCTCTATTACCAACCCGTCATCGGAATTCTCAGTCATCCCGGCGACAGTGCCTCCGGCCGCCTCAGCAATGCTACTAGTGCTTCCTTCATTATTGCTTCCTACGTCAAATTTGTGGAGGCCGCCGGAGCTCGAGTTATTCCCCTCATTTATAATGAGCCAACAGATAAACTTCTAAAGAAGCTCGATTTGGTAAACGGGGTTCTCTTCACTGGTGGATCGGTTAACAGTGGTTTATATTTTGAAACTGTTGGAAGAATATTTAAGAAAGCTCTAGAGAAAAATGATGCTGGAGACAATTTCCCATTATATGCCATCTGCTTAGGTTTTGAACTTATAACAATGATCATAAGCGGGGACAAAAATATACTTGAAGAATTTAAAGCACAAGATCAAGCAAGTACTCTTCAATTTGTGGAGAATGCAAATCTAGAAGGAACTGTATTTCAAAGGTTCCCTCCTGACTTGTTAAAGAAGTTGAGCACAGATTGTTTAGCCAGGCAAAATCACGCTTATGGTGTATCCCCAACAAAGTTTCTTGCTAATCAAAACTTATCTAGTTTTTTTGAGATCTTGACAACTAGCAACGACGAAGAAGACAAGGTTTATGTTTCCACGATTCGTTCACGAAAATATCCGGTGACCGGCTTCCAATGGCATCCAGAGAAAAATCCATTTGGATGGAGCTCACCAACAATTCCACATACTGAGGATGCTATTCAGACAACTCAATATGTTGCAAATTTTTTGGTCAGTGAAGCAAGGAAATCCTTAACCAGACCAGATGCTCAAGAATTAATCGACAATCTCATATACAATTACAGTCCCACTTTTTATGGGAAGGCAGGGGAAGCATATGATGAACTCTATTTATTTGTATAA 1014 0.4073 MSYKVLLFLYLIAIFQCYSEILLPSQLHRDLLISSPVNCPAPNPNLYYQPVIGILSHPGDSASGRLSNATSASFIIASYVKFVEAAGARVIPLIYNEPTDKLLKKLDLVNGVLFTGGSVNSGLYFETVGRIFKKALEKNDAGDNFPLYAICLGFELITMIISGDKNILEEFKAQDQASTLQFVENANLEGTVFQRFPPDLLKKLSTDCLARQNHAYGVSPTKFLANQNLSSFFEILTTSNDEEDKVYVSTIRSRKYPVTGFQWHPEKNPFGWSSPTIPHTEDAIQTTQYVANFLVSEARKSLTRPDAQELIDNLIYNYSPTFYGKAGEAYDELYLFV 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01956 337 Gene3D - 48 337 IPR029062 -
Car01g01956 337 PANTHER GAMMA-GLUTAMYL HYDROLASE 1 12 336 - -
Car01g01956 337 Pfam Peptidase C26 50 266 IPR011697 GO:0016787
Car01g01956 337 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 65 303 - -
Car01g01956 337 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 12 336 IPR015527 GO:0008242
Car01g01956 337 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 41 337 IPR015527 GO:0008242
Car01g01956 337 SUPERFAMILY Class I glutamine amidotransferase-like 73 336 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01956 Car-Chr1 44460936 44464293 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01956 K01307 - gmx:100796947 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01956 01 44460936 44464293 Car01g01956 01 44460936 44464293 ECH