Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01933 ATGTCTGTGTCTGCTTCATTTGCCATTTGTAAAGTTGCTAAAGATGCAGCTGGAGTTGCTGGGAACATTTTTGCTTTTGGGCTATTTGTATCTCCAATACCAACATTTAGGAGAATTATCAGAAATGGGTCAACAGAGATGTTTTCAGGGTTGCCATATATTTATTCCCTAATGAACTGCTTGATTTGCATGTGGTATGGTACTCCTCTAATATCACATGATAATTTGTTGGTTACCACTGTTAATTCAATTGGAGCAATCTTTCAATTTGTGTACATAATCCTGTTTATGATGTCTGCTGAGAAAGAAAAGAAGGTGAAAATGCTTGTATGGTTGATGGCAACTATTGGCGTATTTGCAATTATATTGTTTGGAAGCTTGCAAATAGATGACATTGTTATGCGTCGGCTTTTTGTTGGATTTTTGAGTTGTGCATCTCTTATTTCAATGTTTGCCTCTCCATTGTTTATAATTAAATTGGTCATTCAGACAAAGAGTGTCGAATTCATGCCATTTTATCTCTCACTTTCCACCTTTCTAATGAGCACCTCTTTTCTTCTTTACGGATTACTCAGCAACGATGTCTTCGTATATGTGCCAAATGGGATAGGAACCATTTTGGGAGTAATCCAGTTGATATTATACTGTCACTATGAGAGTAAATCTAGAATAGATTCTGAAGAACCATTGATACTATCATATGATGATCACTTCTGCTGA 720 0.3597 MSVSASFAICKVAKDAAGVAGNIFAFGLFVSPIPTFRRIIRNGSTEMFSGLPYIYSLMNCLICMWYGTPLISHDNLLVTTVNSIGAIFQFVYIILFMMSAEKEKKVKMLVWLMATIGVFAIILFGSLQIDDIVMRRLFVGFLSCASLISMFASPLFIIKLVIQTKSVEFMPFYLSLSTFLMSTSFLLYGLLSNDVFVYVPNGIGTILGVIQLILYCHYESKSRIDSEEPLILSYDDHFC 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01933 239 Gene3D - 136 230 - -
Car01g01933 239 Gene3D - 11 105 - -
Car01g01933 239 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET2 9 234 - -
Car01g01933 239 Pfam Sugar efflux transporter for intercellular exchange 18 103 IPR004316 GO:0016021
Car01g01933 239 Pfam Sugar efflux transporter for intercellular exchange 138 222 IPR004316 GO:0016021
Car01g01933 239 PANTHER RAG1-ACTIVATING PROTEIN 1 9 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01933 Car-Chr1 43966949 43970928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01933 4 234 Miscellaneous Gene Families AT3G14770 67.241 1.57e-109 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01933 K15382 - gmx:100305842 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01933 01 43966949 43970928 Car01g01933 01 43966949 43970928 ECH