Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01932 ATGCTGCAATCATCAATTGCATGCTCTCCACTTCTAAATGGACTTATCAAAATCAAAACACAATCTTACTACACCAACCAAACACAACCTATTTTTCATCGAACTAAATTAAACTCCCACCTTAAACTAACCAACTTTCAACCTCAATCACCGTTAAAACCAAAATTCCCTAAAATCTGTGTCTCCAAAGTGGGTCCACTTCGTTGCGGCGTTTCGTCGAACAGTAACAGTGCAAATGTTGGAAGGAGGAGTGTTCGTGAGTGGGTTGAGGTTGTTGGTGAGGCATTATCGACGGCGTTTCCGTTGTGGGTTACGATTGGGTGTGTGTTGGGTTTGGTGAGACCGAGTTCATTCAATTGGGTTACTCCTAAATTGAGCCTCGTGGGACTTACTGTAATCATGCTTGGTATGGGTATGACTCTTACTCTTGATGATCTTCGTTCTGCTCTATCTATGCCTAAAGAAGTTCTCTCTGGTTTTTTCCTTCAATATTCGGTGATGCCAATATCTGCGTTTCTTATAAGCAAACTCCTAAATCTTCCATCACATTATGCAGCTGGTTTAATATTAGTTGGGTGCTGTCCAGGGGGCACAGCTAGTAATATTGTGACATATCTTGCACGTGGAAATGTGGCGCTTTCTGTTGTAATGACAGCTGCAAGCACTCTATCAGCCGTGATCATGACTCCTTTTCTGACAGCCAAACTAGCTGGTAAGTATGTAGCTGTAGATGCTGCTGGCTTATTAATGTCAACATTGCAGGTTAGCTTTTCTCAAATActtttcctttattttcttttcttttctcttattACAGAAATGATTAATGAGACCCTTTTTTGA 843 0.3998 MLQSSIACSPLLNGLIKIKTQSYYTNQTQPIFHRTKLNSHLKLTNFQPQSPLKPKFPKICVSKVGPLRCGVSSNSNSANVGRRSVREWVEVVGEALSTAFPLWVTIGCVLGLVRPSSFNWVTPKLSLVGLTVIMLGMGMTLTLDDLRSALSMPKEVLSGFFLQYSVMPISAFLISKLLNLPSHYAAGLILVGCCPGGTASNIVTYLARGNVALSVVMTAASTLSAVIMTPFLTAKLAGKYVAVDAAGLLMSTLQVSFSQILFLYFLFFSLITEMINETLF 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01932 280 PANTHER SODIUM-BILE ACID COTRANSPORTER 58 265 IPR004710 -
Car01g01932 280 PANTHER SODIUM/METABOLITE COTRANSPORTER BASS1, CHLOROPLASTIC-RELATED 58 265 - -
Car01g01932 280 Pfam Sodium Bile acid symporter family 128 255 IPR002657 GO:0016020
Car01g01932 280 Gene3D - 84 266 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01932 Car-Chr1 43959710 43963406 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01932 2 266 Organic Solute Cotransporters AT1G78560 61.338 8.47e-104 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01932 K03453 - pvy:116128267 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01932 01 43959710 43963406 Car01g01932 01 43959710 43963406 ECH