Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01921 ATGACTCAAACAGCGTTTTCAGTTTCACCACCAAACCATTGGCTCCAAACAAATCAATCAAACCCAAATACTTTCACCACTTTACGAACCCCAATTCAATTCCTCCGTTTCCCCAACACAAACAATCAAAACGACAAAAAATACCTCCAAACCCTGCGTTTCACTTTAAACTCATCTTCACACACCCCACCACCAGTCGTCGTCGTAGGGTCCGTCAATGCGGACATCTATGTTGACATCGACAGACTCCCTAAAGAAGGCGAAACCGTTTCCGCAAAAAGCGGCCAAACTTTAGCCGGCGGGAAAGGTGCTAATCAAGCTTGCTGCGGTGCTAAGCTGTCGCATCCGACTTATTTTGTTGGTCAGATTGGGAGTGATGCTCATGGAAACCTCGTTGCTGATGCTCTCCGTGACGGCGGTGTTCGGCTTGATTATCTGACCGTTGTGCCGTCTGCTCCGACAGGTCATGCTGTTGTTATGCTTCAGTCTGATGGACAGAATTCTATTGTTATTGTTGGTGGTGCTAATATGAGTTTTTGGCCTCAGAGTTTGCCACGTCAGCATTTGGAGCTTGTTTCGAATGCTGGCATTGTTTTGTTGCAGAGGGAGATTCCTGATTTTGTTAACATTCAAGTGGCAAAGGCTGCAAGGAATGCTGGTGTTCCCGTAATATTTGATGCTGGGGGAATGGATGCACCAATTCCACAAGAATTACTGGATTATGTTGATATTTTTAGTCCTAATGAAATTAAGCAAGTTCTTGTTAAACTTGGAGCCGAAGGATCTGTCCTATTCATAGAAGGAGAAGAACCAATTCAGCAACCTGCCATCTTTGCTAAAACAGTCGTTGATACAACTGGTGCTGGCGATACTTTTACTGCTGCTTTTGCTGTAGCCTTGGTAGAGGGCAAGTCCAAAAAGGAATGCCTCAGATTTGCCGCTGCTGCAGCATCTCTTTGTGTTCAAATACTTGCAAAAGAGTCCATAAACCTGAGTAGCAGGAACAGAATAACTGCATGGCAGAGAGAAGCCCTGGTAAATGACAAGGAAAACAACTTTTCTGAAGAAGCATTTTTATGA 1080 0.4454 MTQTAFSVSPPNHWLQTNQSNPNTFTTLRTPIQFLRFPNTNNQNDKKYLQTLRFTLNSSSHTPPPVVVVGSVNADIYVDIDRLPKEGETVSAKSGQTLAGGKGANQACCGAKLSHPTYFVGQIGSDAHGNLVADALRDGGVRLDYLTVVPSAPTGHAVVMLQSDGQNSIVIVGGANMSFWPQSLPRQHLELVSNAGIVLLQREIPDFVNIQVAKAARNAGVPVIFDAGGMDAPIPQELLDYVDIFSPNEIKQVLVKLGAEGSVLFIEGEEPIQQPAIFAKTVVDTTGAGDTFTAAFAVALVEGKSKKECLRFAAAAASLCVQILAKESINLSSRNRITAWQREALVNDKENNFSEEAFL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01921 359 CDD ribokinase 70 329 IPR011877 GO:0004747|GO:0006014
Car01g01921 359 Gene3D - 55 250 IPR029056 -
Car01g01921 359 PRINTS Ribokinase signature 237 252 IPR002139 GO:0016301
Car01g01921 359 PRINTS Ribokinase signature 167 180 IPR002139 GO:0016301
Car01g01921 359 PRINTS Ribokinase signature 68 89 IPR002139 GO:0016301
Car01g01921 359 PRINTS Ribokinase signature 95 114 IPR002139 GO:0016301
Car01g01921 359 PANTHER SUGAR KINASE 251 322 - -
Car01g01921 359 PANTHER SUGAR KINASE 63 249 - -
Car01g01921 359 SUPERFAMILY Ribokinase-like 64 324 IPR029056 -
Car01g01921 359 MobiDBLite consensus disorder prediction 1 21 - -
Car01g01921 359 Hamap Ribokinase [rbsK]. 64 338 IPR011877 GO:0004747|GO:0006014
Car01g01921 359 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 284 297 IPR002173 GO:0016773
Car01g01921 359 Gene3D - 251 341 IPR029056 -
Car01g01921 359 Pfam pfkB family carbohydrate kinase 250 322 IPR011611 -
Car01g01921 359 Pfam pfkB family carbohydrate kinase 66 249 IPR011611 -
Car01g01921 359 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 100 124 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01921 Car-Chr1 43788665 43792307 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01921 K00852 - gmx:102666284 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01921 01 43788665 43792307 Car01g01921 01 43788665 43792307 ECH