Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01910 ATGTTTAGTACAGCCATGGCTAAACTGCCTCTTCTCATTTTCCTTCTTTTCTTGTCTCTCTCATCAGGAGGAAATGTGATTTTGGTTAATGGGCAGAGAACTTGGTGTGTGGCAAAACCTTCATCAGATCAAGCTACACTTTTATCAAACCTCAATTATGCTTGCTCTCAAGTTGATTGTAGAGTTCTTCAGAAAGGATGCCCCTGTTCTACCCCTGACAATCTTATGAACCATGCTTCCATAGCTATGAATCTCTATTATCAATCTAGGGGAAAAAACCACTGGAATTGTGATTTCAGAGCCTCTGGAATAGTTGTTGTGACTGATCCAAGTTATGGTAACTGCATTTACGCTTAG 357 0.4006 MFSTAMAKLPLLIFLLFLSLSSGGNVILVNGQRTWCVAKPSSDQATLLSNLNYACSQVDCRVLQKGCPCSTPDNLMNHASIAMNLYYQSRGKNHWNCDFRASGIVVVTDPSYGNCIYA 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01910 118 SMART X8_cls 34 117 IPR012946 -
Car01g01910 118 Pfam X8 domain 34 103 IPR012946 -
Car01g01910 118 PANTHER MAJOR POLLEN ALLERGEN OLE E 10-LIKE 9 118 - -
Car01g01910 118 Gene3D - 29 116 - -
Car01g01910 118 PANTHER BETA-1,3 GLUCANASE 9 118 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01910 Car-Chr1 43620240 43622408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01910 22 115 Glycoside Hydrolase AT2G05790 42.708 2.16e-19 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01910 - - cam:101502498 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01910 01 43620240 43622408 Car01g01910 01 43620240 43622408 ECH