Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01653 GTTTGTCCTCTCCTGTGGGAAGGACTCTACCATAAAGCTTTGGGAGGTTGGCTCTGGAAGATTAGTCAAACAGTATCTTGGTGCCATACATACACAACTAAGATGCCAGacaagtcaaaatcatgaatggtttagttatgcacatttcgggacagaagaATTTATTCTATCCATAGATGAACTGAACAACGAGATTGTTATCTGGGATGCGATGACAACAGAAAAAGTAGCAAAATGGCCTTCGAATCATGATGGTGCACCACGCTGGCTTGAACACTCATCAGTAGAGTCTGCTTTTATTTCATGTGGAACTGATAGATCAATTCGGTTCTGGAAAGAAACTACATAA 349 0.3553 FVLSCGKDSTIKLWEVGSGRLVKQYLGAIHTQLRCQTSQNHEWFSYAHFGTEEFILSIDELNNEIVIWDAMTTEKVAKWPSNHDGAPRWLEHSSVESAFISCGTDRSIRFWKETT 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01653 115 SUPERFAMILY WD40 repeat-like 2 112 IPR036322 GO:0005515
Car01g01653 115 ProSiteProfiles Trp-Asp (WD) repeats profile. 1 24 IPR001680 GO:0005515
Car01g01653 115 ProSitePatterns Trp-Asp (WD) repeats signature. 2 16 IPR019775 -
Car01g01653 115 PANTHER CLEAVAGE STIMULATION FACTOR SUBUNIT 1 1 114 IPR044633 GO:0005848|GO:0031124
Car01g01653 115 Gene3D - 1 115 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01653 Car-Chr1 36287210 36293842 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01653 K14406 - gmx:100809908 195.667