Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01628 ATGAGGGAACCGTTGTTGTGGGGGAGAGAAGAGAAGAGTGGGAACAAGAGAGGGAAAGTGATTTGGGAAGGGTTAATGATGATGAGTAACAATAAAGTTGAAAAGTTGAAGAATACGGTGTCGGCGAGGTCTTCAAGGATGAAATTGTGGATGATACGGGCTACCACAACGGTGTTACTGTGGACTTGCATCGTTCAGTTAACTGCAATTAGTGATATGTGGGGTCCTAGAGCTTTGAAAGGTTGGCCTTCTTGTTTTACACATGAATCTGCACTCATCGAGTTGCCTTCTACACAGCCCAGAGTTCTTCCACCCAAGAGGGTTTATAAAAACAATGGTTACTTGATGGTGTCGTGCAATGGAGGATTGAACCAAATGAGAGCGGCGATATGTGATATGGTGGCAATTGCAAGATATTTAAATGTCACGCTTATAGTCCCTGAATTGGATAAAGCTTCCTTTTGGGCTGACCCCAGTGAGTTCCAAGATATATTTGATTTGGACCATTTTATTACATCCTTAAGAGATGAGGTGCGGATATTGAAAGATTTGCCTCCTAGACTCAAGCAGAAAGTGGAAAATGGGTTTCTTTACACTATGCCACCGATTAGTTGGTCTGACATGTCTTACTATAAGAACCAGATTCTGCCATTGATACAAAAGTATAAAGTTGTCCATTTGAATCGAACTGATGCTCGGCTGGCCAATAATGGACAATCTCTGGAGATTCAGAAGCTGCGTTGCCGAGTCAATTTTAGTGCTCTTAGATTTACTCCTCAGATTGAGGAGTTAGGCAGAAAGGTGATCAATCTTCTGAGGCAGAAAGGACCATTTCTGGTACTTCATTTGAGGTATGAGATGGACATGTTGGCGTTTTCTGGCTGTACTCAAGGTTGCAACAGTGATGAGGTGGAAGAATTGACAAGGATGAGATATGCTTATCCTTGGTGGAAAGAAAAAATAATTAATTCGGATTTGAAAAGAAAAGATGGTTTATGTCCTTTAACACCCGAGGAGACTGCCCTTGCACTTAGGGCCTTTGACATCGATCAAAACATTCAAATCTACATTGCAGCTGGGGAAATATATGGTGGGAATAGGAGAATGGCCAGCCTTGCAAAGAACTATCCAAAACTGGTCAGAAAGGAAACACTGTTGGAACCGTCTGAACTTCAGTTCTTCCAAAATCATTCCTCTCAAATGGCAGCATTGGATTATCTTGTTTCATTAGAGAGTGATATATTTGTTCCTACGTATGATGGAAATATGGCAAAAGTAGTTGAAGGTCATCGCAGATATCTTGGGTTCAAAAAGACCATTTTATTGAACAGAAAGCTCCTAGTTGATTTGATAGATCAATACAACAATGGAGTAATGAACTGGGATGAATTCTCTTCAGCTGTGAAGGAAACTCATGCTGATCGCATGGGAGGAGCAACGAAAAGATTGGTAATCCCTGATAGGCCAAAAGAAGAGGATTATTTCTATGCAAATCCTGATGAATGTTTAGAACCATCAGAAGATGATATGTTGAGTAGTACAGCGTGA 1548 0.4102 MREPLLWGREEKSGNKRGKVIWEGLMMMSNNKVEKLKNTVSARSSRMKLWMIRATTTVLLWTCIVQLTAISDMWGPRALKGWPSCFTHESALIELPSTQPRVLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKASFWADPSEFQDIFDLDHFITSLRDEVRILKDLPPRLKQKVENGFLYTMPPISWSDMSYYKNQILPLIQKYKVVHLNRTDARLANNGQSLEIQKLRCRVNFSALRFTPQIEELGRKVINLLRQKGPFLVLHLRYEMDMLAFSGCTQGCNSDEVEELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALALRAFDIDQNIQIYIAAGEIYGGNRRMASLAKNYPKLVRKETLLEPSELQFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRYLGFKKTILLNRKLLVDLIDQYNNGVMNWDEFSSAVKETHADRMGGATKRLVIPDRPKEEDYFYANPDECLEPSEDDMLSSTA 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01628 515 PANTHER GDP-FUCOSE O-FUCOSYLTRANSFERASE-LIKE PROTEIN 27 508 - -
Car01g01628 515 CDD O-FucT_plant 114 439 IPR024709 -
Car01g01628 515 PIRSF UCP009360 12 500 IPR024709 -
Car01g01628 515 PANTHER OS02G0726500 PROTEIN-RELATED 27 508 - -
Car01g01628 515 Pfam GDP-fucose protein O-fucosyltransferase 114 434 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01628 Car-Chr1 34831294 34835360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01628 110 503 Miscellaneous Gene Families AT2G37980 50.000 3.48e-132 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01628 K23280 - gmx:100778901 914.45