Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01580 ATGGAAGCCACAACAGAAATATACCCAATAGATGATGCATATGGATTATTCTTATGGATTGGAACTCCAGTGCAAATTATATTAGTTATGTTGGACATAGGAAGTCCAATTTCTTGGTCACAATGTGACCCATGTAATAGTTGTTACCCTATGCAACGTTCTCCCTTTAATACTAGAGCATCAAGTACCTTTAGAGAACTTGGTTGTTACTCAGATACATGTTTGATTCCAATGATGAGGAAACTTTTTGGTAATTGCACTGGATGGACATGTAGATATAATGTGAAATATGGTAAGGATCAATCTCATTCTTTTGGTGTAATGGTGACTGATACACTTAACTTTGAAAATTCTAATGCAGAGGTTGAGAATTTCATCATTGGTTGTGGAGATTCATTTGAGGGTCCATTTAGGACTCAGTTTTCAGGTGTTTTTGGTTTAGGACGTGGTCCACTTTCAGTTCAAAGTCAACTCAATGCAAAGGCTTTTTCTTTTTGTCCTGTAAGTCAAGAATCAGAAAGACATTCAATTCTTGAGTTTTATGACACTCCACCTAAAATAGTGGACAAACATGGTAGTGTTGGTGATAATAGTTCTATTATGGTTCCTTTAAGTGAGAACAGTGGATACCCTTTTTATTATTTTTTGCAATTTGTTGGCATAGGTATTAATGGGTTTATGTTGGATATTCAATCTAGAGTTTGGGGGTATGGCGTGAACTATGATGGTGGGGTTATTGTAGATATTGGAACAATGCTAACTTATTTACCAAGTGAAGCTTATAATGTGTTCAAATCGGAGATACTAAGAACAGATCATAACCTGACAACAAAGCCAGGATACGAGGGGTTAGAGTTTTGTTATAAAGATGATTCATCTAATGTATTTCCAACTATTGAACTTTATTTTGAAAATGGAAATATTGCAGGTGAGAATTTTGTGTCTTACAAGTTGAACAACAATCAGTTACTCTTCACAGCAGAAGAAGGAACAGTTTGTCTATCGTTTGCAGAAGGAAAAAGTTCTGCTCTAACTGTGATTGGTAGTCACCTACTTCAAGGAACTTTATTGATGTATGATCTGGTCAATGAGAACCTTGTTCTTACATTTAATAAGTGTTAG 1122 0.3529 MEATTEIYPIDDAYGLFLWIGTPVQIILVMLDIGSPISWSQCDPCNSCYPMQRSPFNTRASSTFRELGCYSDTCLIPMMRKLFGNCTGWTCRYNVKYGKDQSHSFGVMVTDTLNFENSNAEVENFIIGCGDSFEGPFRTQFSGVFGLGRGPLSVQSQLNAKAFSFCPVSQESERHSILEFYDTPPKIVDKHGSVGDNSSIMVPLSENSGYPFYYFLQFVGIGINGFMLDIQSRVWGYGVNYDGGVIVDIGTMLTYLPSEAYNVFKSEILRTDHNLTTKPGYEGLEFCYKDDSSNVFPTIELYFENGNIAGENFVSYKLNNNQLLFTAEEGTVCLSFAEGKSSALTVIGSHLLQGTLLMYDLVNENLVLTFNKC 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01580 373 CDD pepsin_A_like_plant 18 366 IPR034161 -
Car01g01580 373 SUPERFAMILY Acid proteases 11 369 IPR021109 -
Car01g01580 373 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 14 362 - -
Car01g01580 373 Pfam Xylanase inhibitor N-terminal 18 179 IPR032861 -
Car01g01580 373 Pfam Xylanase inhibitor C-terminal 214 366 IPR032799 -
Car01g01580 373 ProSiteProfiles Peptidase family A1 domain profile. 14 369 IPR033121 -
Car01g01580 373 Gene3D Acid Proteases 5 180 IPR021109 -
Car01g01580 373 PANTHER OS07G0603500 PROTEIN-RELATED 14 362 - -
Car01g01580 373 Gene3D Acid Proteases 187 373 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01580 Car-Chr1 33332170 33333291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01580 7 360 Miscellaneous Gene Families AT1G77480 24.802 5.05e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01580 - K22683 aprc:113874191 594.349