Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01562 ATGGCAGAAACGACTATAATAGGTCGAACTAGAAGTGATGCATCAGTAGCAGGCGCAGCGGAGACACTTCGTGCTCAACAGCAACTTCTGCAGAAGCTGTACGCAGAGTTGGATAATGAAAGGGAATCCTCAGCCACAGCAGCCAGAGAAGCAATGGATATGATACTGCGTTTACAAGGAGAGAAGGCTGCAGTTGAGATGGAGGCAAGTCAGTTCAAGAGAATGGCAGAAGGGAAGATGGGCCACGCGGAAGCCATCATCGAAGCTTTCGAAGAACTTTTGTATGACAAGGAAATGGAAACAGCATCTCTGAAGTTTCAATTGCAGGCTTACAAAGACAAACTTGTGAGCTTCGGGTGTGTTCTCAATGCAAGTGAGTTTCAGAATGCAAACTCAAATTCAAGTGATGAAAGTAGTGGCACGGTTATGAGAAGGCTGCAATCATTGCCGCCTATTCCGTTTAAAAAGATTATGACCTTGAGAGAGAGTGTTACTCAGAAGATGGAAAGATCACCTAGTCTGGCTCCGGTTTCGGGTGACAAGGAACCTAGCTTGGTGTTTGGCAGTGGAACTATTGATTCATACTGGAACAAGATAAAGATGTTACATGAACAAGTGAAAGTGATTTCAGATTGTTATAATAACAAAGGAACAAACTTGAGAAGTAGAGGAGGGAGGTCAAGTTCAACATTTTCACAAGCTACCAGTAAGATAACCTGTGAGTGTGACCAAGAACACAGATTGGACACTACCAAATACAATGAAGTAGCAAGTCACGGTGAAAGTGTGTGCGACAATACAGCACTTGCCGATCATCGTTGCTGGACTAAGGTCCTGGATGTATTTGAAGTCCCACAAGCCATAAAAAAGCACGAAGTCAGTGATAATGAAGGGAGAAAAAGGCTTGAGAAATGGAATACTGTGACAGATAATAGATTAACAAAATCAGAATCTGTGTCTGAGGAAGTGGTTGAATCGCCTTTTAAATTTATCGCTGACAAGAAAAAGGGCACAGTGAGTTTCGTTGGCCAGCAGAAAGAAAGGATGGGTGTGGATTGTAATTCTCAAGCTGAAGTTCGTCAGAGAATCGCGAGGTTTCAGAGGCAGAAAATTAGTAGAAGGACTCATGAGACTACCCATGGTGTTGAATTAGGTGATGGTGATGAACAGTTGAGGCTGTTGAAGGACATACAAATTAACCTGAAATTAATACAGACAGAAATGAAAAGCTGGAAAACAAAAAATGCAACTCCTGTGGATAATGCAGTGTCTTTTGATATTCTCAAAGAGGCAATGTTGCACTTTTGGATTTGA 1314 0.4224 MAETTIIGRTRSDASVAGAAETLRAQQQLLQKLYAELDNERESSATAAREAMDMILRLQGEKAAVEMEASQFKRMAEGKMGHAEAIIEAFEELLYDKEMETASLKFQLQAYKDKLVSFGCVLNASEFQNANSNSSDESSGTVMRRLQSLPPIPFKKIMTLRESVTQKMERSPSLAPVSGDKEPSLVFGSGTIDSYWNKIKMLHEQVKVISDCYNNKGTNLRSRGGRSSSTFSQATSKITCECDQEHRLDTTKYNEVASHGESVCDNTALADHRCWTKVLDVFEVPQAIKKHEVSDNEGRKRLEKWNTVTDNRLTKSESVSEEVVESPFKFIADKKKGTVSFVGQQKERMGVDCNSQAEVRQRIARFQRQKISRRTHETTHGVELGDGDEQLRLLKDIQINLKLIQTEMKSWKTKNATPVDNAVSFDILKEAMLHFWI 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01562 437 Coils Coil 20 50 - -
Car01g01562 437 PANTHER BNAANNG28530D PROTEIN 15 419 - -
Car01g01562 437 Coils Coil 394 414 - -
Car01g01562 437 Pfam Zein-binding 21 108 IPR007656 -
Car01g01562 437 ProSiteProfiles GTD-binding domain profile. 14 112 IPR007656 -
Car01g01562 437 PANTHER OS08G0442350 PROTEIN 15 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01562 Car-Chr1 32755041 32757219 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01562 - - cam:101499309 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01562 01 32755041 32757219 Car01g01562 01 32755041 32757219 ECH