Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01547 ATGGCCACATCCAACCTCTCCCACCAAATTTCCCGACCATTTCCTACAGCTTGCGTCAGTATCCGGCCACCAATCACTGCCGCCAACAACCAGAAGAACCCTTCACCTCCTCTCAAACCACATAGAGACCACCGTAAACTATCCCTTAAACCCAAATCAAAAAATCACTTAAATTGGGCAATCAAGCTAAGCTTAGCAGAGCAGAGTCCACCAAAATCAACGTTAGATTTGGAGCAACTCGTAGGCTTTCTATACGAAGATCTTCCTCATCTCTTCGATGATAAGGGTATTGATAAAAGTGCTTATGACGAACGTGTCTTCTTTCGAGACCCAATCACTAAGCATGATGATTTAAATGGCTACCTTTTCAACATTGCTCTTCTTAAGACACTCTTTACACCTCAGTTTTACTTGCATTGGGTTAAACCGACAGGACCTTATGAGATAACTACAAGATGGACAATGGTTATGAAATTCATGCTACTTCCATGGAAACCTGAATTGGTCTTTACAGGAACTTCTGTTATGGGCGTTAACCCTGAAAATGGCAAGTTCTGTAGCCATGTGGACTTTTGGGATTCAATTGAGAAAAATGACTATTTTTCATTTGAAGGTTTATTGGAATTATTCAAACAGTTGAGGATTTACAAGACACCGGAATTGGAATCACCCAAATATCAAATATTGAAAAAGACAGCAAATTATGAGGTTAGACAGTATGATCCGTTCGTAGTAGTAGAAACAAATGGAGACAAGCTATCTGGGTCTACTGGCTTTAATGATGTTGCTGGATATATATTTGGGAAGAATTCAACGACTGAGAAGATAGCAATGACAACTCCAGTTTTCACTCAAGCCATTGATGCTGATTTGTCCAAAGTGTCCATCCAAATAGTTCTTCCATTAGACAAAGAAACAAATAGTTTACCAAATCCTAATAAAGAAACAGTTATCTTGAGAAAATTAGAAGGAGGCGTTGCTGCAGTAATAAAGTTTAGTGGCAAACCTACAGAGGATAGTGTTCGCGAAAAGGAGAAAATGTTGCGCTCCAATATCATTAAAGATGGTCTTAAACCTCAGCCAGGCTGTTTGTTTGCGCGGTACAATGATCCAGGTCGAACATGGACTTTTATAATGAGGAATGAAGTGCTCATTTGGCTATATGACTTCTCATTGGATTAG 1182 0.3951 MATSNLSHQISRPFPTACVSIRPPITAANNQKNPSPPLKPHRDHRKLSLKPKSKNHLNWAIKLSLAEQSPPKSTLDLEQLVGFLYEDLPHLFDDKGIDKSAYDERVFFRDPITKHDDLNGYLFNIALLKTLFTPQFYLHWVKPTGPYEITTRWTMVMKFMLLPWKPELVFTGTSVMGVNPENGKFCSHVDFWDSIEKNDYFSFEGLLELFKQLRIYKTPELESPKYQILKKTANYEVRQYDPFVVVETNGDKLSGSTGFNDVAGYIFGKNSTTEKIAMTTPVFTQAIDADLSKVSIQIVLPLDKETNSLPNPNKETVILRKLEGGVAAVIKFSGKPTEDSVREKEKMLRSNIIKDGLKPQPGCLFARYNDPGRTWTFIMRNEVLIWLYDFSLD 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01547 393 Pfam Uncharacterized conserved protein (DUF2358) 79 188 IPR018790 -
Car01g01547 393 Gene3D Regulatory factor, effector binding domain 220 389 IPR011256 -
Car01g01547 393 PANTHER HEME-BINDING PROTEIN-RELATED 59 393 IPR006917 -
Car01g01547 393 SUPERFAMILY Probable bacterial effector-binding domain 212 386 IPR011256 -
Car01g01547 393 SUPERFAMILY NTF2-like 76 193 IPR032710 -
Car01g01547 393 MobiDBLite consensus disorder prediction 26 45 - -
Car01g01547 393 Pfam SOUL heme-binding protein 221 385 IPR006917 -
Car01g01547 393 PANTHER SOUL HEME-BINDING FAMILY PROTEIN 59 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01547 Car-Chr1 31955573 31959180 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01547 - - gmx:100789568 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01547 01 31955573 31959180 Car01g01547 01 31955573 31959180 ECH