Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01527 ATGGTCTCTCCGAAGCAGCTTCTAGCCACCTTGGAATCAGCGCTTCTCGGTTCCTCTCCCCCAACACCGTCTCAACGGGTCCAACTCTTACACGCCATTCGCGCTTCTCTTCACTCCTTCCAATCCCTTCTATCGTATCCGCCCCCAAAGCCCTCTGATCGAAGTCAAGTTCAGTCAAAATCAATTAGACTTCAAGATTCAACCCTTATTACACTTGATGACCAGGATGTTCAAATTGCACTCAAATTGAGCGATGATCTCCATCTCAATGAGGTAGATTGCGTTCGCTTGCTTGTATCGGCTAATCAAGAGTGGGGTTTAATGGGTAGGGAACCACTGGAAATTCTACGGCTTGCAGCAGGACTCTGGTATACAGAAAGAAGATATATCATAACATCCCTTCATCTTCTGTTGAGGGCTGTGGTGCTTGATCAGGGACTTGAAGATGATATATTGGTTGAGATTCAAAAATATCTAGAAGATATTATCAATTCTGGACTTAGACAGCGGTTGATTTCTCTAATCAAGGAACTCAATAGAGAAGAGCCTTCTGGTGTGGGTGGTCCTCAGTGTGAGCGCTATGTTATTGATTCAAGAGGTTCTCTTGTGGAGAGGCAGGCAGTTGTCTCTAGAGAAAGACTTATTTTGGGACACTGCCTTGTCCTTTCTGTTCTGATTGTTCGAACAAGTCCTAAGGAAGTGAAAGACTTATTCTCTGTTTTGAAAGATAGTGTTTCTGAAGTCAGTCAGAGCAATACCGCCATAAAACATCAGATTAGCTTTAGCCTTCTGTTTGCCCTTGTGATCGCATTTGTTTCAGATGGTTTGAGTACAGTGCCTGATAAAGCATCTGTCCTCTCTTCCAATACATCCTTCAGACTTGAATTTCATGAACTTGTAATGGCTACTGGAAATGATCCAATTGTTGAGGGATTCACTGGTGGCATAAGACTTGCTTGGGCGGTACATTTGATGTTAATAAATGATGGTGTTGCAGCAAGGGACACTGGTTCAAGTACTTCATCAAATGAAATGAGTTACCTTAGTCAATGTTTGGAAGTCATTTTCTCAAATAATGTCTTTCAGTTTTTACTGGAGAAAGTTCTTCGAACTGCTGCCTACCAGACTGAAGATGAAGATATGGTCTATATGTACAATGCTTATTTGCACAAGCTGATGACGTGCTTCTTGTCTAACCCTCTAGCTAGAGACAAGATAAAAGAGTCCAAGGAGAAGGTTATGAGTGTGCTTAGTCCATACCGAGTTGTTGGATCACATGATTTTGCACAGAACAGTAGCTCAATTTCTCAACAAGGCACTGAAACAAGCTCTTTACCATTTAATTCAATCTTGGACTTTGTGAGCGAAATTTATCTGAAAGAACCAGAGCTTTTGTTGGGAAATGATGTGCTGTGGACATTTGTAAATTTTGCTGGAGAGGACCATACAAATTTCCAAACGCTTGTGGCTTTCTTGAATATGTTGAGCACCTTGGCTTCTAGTCAAGAAGGTGCTTCAAAGGTTCATGAGTTGCTGCAAGGTAAAGCATTCCGCTCGATTGGCTGGAGCACTTTGTTTGAATGCTTAACAATTTACGATGAGAAATTCAAACAGTCCCTTCAAACTGCTGGAGCAATGTTGCCTGAAATTCAAGAGGGGGATGCAAAAGCACTTGTGGCATATTTAAATGTTTTGAAGAAGGTTGTGGAAAATGGTAACCCTATAGAAAGGAAAAACTGGTTTCCTGATATTGAGCCTCTGTTTAAACTCCTCAGTTATGAAAATGTACCCCCTTATCTTAAGGGTGCCCTAAGGAATGCAATAGCCACATTTATTCATGTCTCTCCAGTGTTGAAGGATAGCATTTGGACCTATCTTGAGCAATATGATCTGCCAGTAGTTGTTGGGCCTGATGTCCAGAGCAGTCCATCCATCGGTGCTCAGGTTTATGATATGCAATTTGAATTAAATGAAATTGAGGCAAGAAGAGAACAATACCCTTCAACTATATCTTTCCTTAATTTGATAAATGCTCTTATTGCGGAAGAAAGAGATTTGACTGATAGAGGGCGAAGGTTTATTGGCATCTTTAGGTTCATCTATGATCATGTTTTTGGGCCATTTCCTCAAAGAGCATATGCAGATCCGTGCGAAAAATGGCAGTTAGTTGGTGCTTGCCTTAAACATTTTCACATGATATTAAGCATGTATGATATCAAGGATGAAGACTATGAGGGTGTAGTTGACCAGTCTCGACTTTCGACAACGAAAGAATCTACCTTACTTCAGACACAGCTTCCTGTTCTAGAGTTGCTGAAGGATTTCATGAGTGGAAAGACTGCGTTCCGGAACATCATGAGTATTCTTCAGCCAGGGGTAAATTCCATCGTTGCTGAACGCAGTAGTCAAATACATGGACAGTATTTAGAGAATGCAGTGCAGCTTTCATTGGAAATTATAATACTTGTTCTTGAAAAGGATTTACTTCTTTCTGATTATTGGCGTCCATTGTATCAGCCATTGGATAATATACTCTCGCATGATCATAATCAAATAGTGGCTCTGTTGGAGTATGTCAGATATGATTTTCAGCCAAAAGTTCAGCAATCATCTATCAAAATCATGAGTATTTTAAGCTCTCGTATGGTTGGGCTTGTTCAACTATTGCTTAAATTTAATGCCTCAAACAGCTTGATAGAAGATTATGCAGCTTGCCTTGAGGCACGGTCAGAAGAGTCTCAGATTGTTGAAAATAATAATGATGATCCTGGCATTCTTATTATGCAACTTCTAATTGACAACATCAGCAGGCCAGCTCCAAATATCACTCATTTACTACTTAAGTTTGATCTAGATACGCCTGTTGAGCGAACAGTTTTACAGCCTAAATTTTATTACAGTTGCATGAAGGTTATTCTTGATATTCTGGAGAAGCTTTTGAAGCCAGATGTAAATGCATTGCTTCATGAATTTGGTTTTCAGCTTCTTTATGAGTTATGCACAGATCCACTTACATCTGTTCCTACAATGGATCTGTTGTCAAATAAAAAGTACCAATTTTTTGTCAAGCACCTTGACACAATTGGCATTACTCCACTTCCTAAACGTAATAGCAACCAGCCGCTTCGTATCAGTTCCCTTCATCAGAGAGCATGGCTCTTAAAACTTTTAGCCGTTGAGCTACATGCTGGTGATGTTAGTAACCCCCATCATAGAGACGCTTGTCAGACAATCCTTTCTAATCTTTTTGGACAAGGTACAACTGGAATTGATGGAGGGCAGGCCATATATCCACTTTCCCATCCAGATACTTTCGGAAATGCTGATTTCAGAAGTTTTAGTAAGAGTAAGGTATTAGAATTGCTTGACATCATCCAGTTTAGATGTCCAGATTCCACTAATAAGCTGTTGAATACTGTGGCTGGTATGAAGTATGACTTGCTGGCAGAAGACATACTAGGAAATTCTGGAAAGGGTGGTGTCTACTATTATTCTGAGAGAGGTGACCGATTAATTGACCTTGCTTCCTTCAACGACAAACTTTGGCAGAAATATAATTCTGCATATCTTCAGATTAGTAATCTTGGCAATGAAGTTGAGCTAAATGATGTACGAGAGACAATTCAACAGTTGCTGAGGTGGGGATGGAAATACAATAAAAATCTTGAGGAGCAAGCTTCACAACTACATATGTTGACTGCCTGGTCTCAGATTGTTGAGGTGTCTGCATCTAGAAGATTAACAATGCTTGAAGATCGATCTGAAATTCTCTTTCAGATCCTTGACGCATCTCTTAGTGCATCTGCTTCTCCAGATTGTTCACTGAAGATGGCATTCATATTATCACAGGTAGCATTGACATGCATGGCTAAACTGCGAGATGAAAGGTTTATGTTCCCAGGAAGTCTAAGTTCTGACAATATAACATGCCTTGATCTCATTGTTGTGAAACAATTATCAAATGGTGCTTGTTTGACCATATTGTTTAAGCTTATCATGGCAATTCTTAGAAACGAATCTTCCGAAGCTCTTAGGAGACGCCAATATGCCTTGCTTCTTAGCTATTTCCAGTATTGTTTGAATGTGGTTGATCCTGATGTTCCAACCTCTGTTCTTCAATTCTTATTGCTCAGTGAACAAGATAATGAATATATTGATCTCCAAAAGATTGACAAAGAACAGGCAGAACTGGCTCATGCAAATTTTTCTACTTTGAGGAAAGAGGCTCAGAGCATCTTGGATTTGGTCATAAAAGATGCAACTCATGGCAGTGACCCTGGAAAAACAATATCACTTTATGTTCTTGATGCGTTGATTTGTATAGATCATGACCGATATTTCTTGAGCCAACTTCAAAGCAGGGGATTTTTAAGGTCTTGCCTTACTGCCATAAGCAACATTTCCAATCAGGATGGTGGTCTTTCACTAGACTCTTTGCAGAGGGCATGCACTTTTGAGGCTGAACTTGCTGTATTACTAAGAATCAGTCATAAGTATGGGAAATCCGGAGCACAGGTACTATTTACCATGGGCACATTGGAGCATCTTTCATCAGGCAGGGCAACCAATTCGCAGGGAGGATTAAGGTGGGTTGAGACAAGACTTAGAAGAGATATGGCTGTGGATGTTGATCGACAGCAGATGATTATAACTCCAGTCTTAAGATTAGTGTTTTCGTTAACTTCCTTGGTTGATACATCAGATTATATGGAGGTGAAAAACAAAATTGTTCGTGAAGTGATTGATTTTGTCAAAGGGCATCAATCATTATTTGATCAAGTTCTACGTTTAGAAATTGCTGAAGCAGATGAGTTAAGAATGGAGCAGATCAATCTCGTTGTTGGTATTCTAAGCAAGGTTTGGCCATATGAAGAGAGTGACGAGTATGGTTTTGTTCAAGGGCTTTTTGGTTTGATGCGTGCTCTTTTCTCTCGTGACTCAAACTCGAAGCTTCCAGGTTTTACTCGATCAAGAGTTTTACCTGAGAATCAGAGGAGTTCAGAACTACAAATATTTAAGTTGTGTTTCAGCCTGAGCTCTTACTTATATTTTCTAGTCACAAAGAAATCCTTGAGATTACAGTCCTCCGACTCCTCCTCTAATTACCCTACTTCCATGGAACTTCAACAACCTACATTGAGCTTGCTTAATTCTCTTCTCACTTCTGTTACAAATGCACTTGAAAGGGCAGCTGATGAAAAATCCTTATTACTGAACAAGATTCGAGACATAAACGAATTGCCTAGGCAGGAGGTGGATGAGATCATCAGCATGTGTGTCCAGCAAGAATCTGTTTCATCTTCTGATAACATACAAAGAAGGAGATACATTGCAATGTTAGAGATGTGTCGAGTAGTTGCTTGTAGGGATCAGTTAATCATTTTATTGCTCCCACTCTCCGAACATGTGCTAAATATCATCCTCATCCACCTTCAGGATAGCTCTGATGCATTTGAATCTACCATGACCGCCAAAACAATTACATATGGTGCAAAGTATGATCCACAACAAGACTTTGCTTTGTTATGTGGACAGTTAGTTCCAACCCTTGAACGACTCGAGTTGCTGAGTGAGGAAAAATTAGGGCATAATCTGAAAGTATTTTGCAGATTAGCAACTTCTGCCAAAGAGATTGCAATCCAGAAGATGATTTAG 5655 0.4 MVSPKQLLATLESALLGSSPPTPSQRVQLLHAIRASLHSFQSLLSYPPPKPSDRSQVQSKSIRLQDSTLITLDDQDVQIALKLSDDLHLNEVDCVRLLVSANQEWGLMGREPLEILRLAAGLWYTERRYIITSLHLLLRAVVLDQGLEDDILVEIQKYLEDIINSGLRQRLISLIKELNREEPSGVGGPQCERYVIDSRGSLVERQAVVSRERLILGHCLVLSVLIVRTSPKEVKDLFSVLKDSVSEVSQSNTAIKHQISFSLLFALVIAFVSDGLSTVPDKASVLSSNTSFRLEFHELVMATGNDPIVEGFTGGIRLAWAVHLMLINDGVAARDTGSSTSSNEMSYLSQCLEVIFSNNVFQFLLEKVLRTAAYQTEDEDMVYMYNAYLHKLMTCFLSNPLARDKIKESKEKVMSVLSPYRVVGSHDFAQNSSSISQQGTETSSLPFNSILDFVSEIYLKEPELLLGNDVLWTFVNFAGEDHTNFQTLVAFLNMLSTLASSQEGASKVHELLQGKAFRSIGWSTLFECLTIYDEKFKQSLQTAGAMLPEIQEGDAKALVAYLNVLKKVVENGNPIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIATFIHVSPVLKDSIWTYLEQYDLPVVVGPDVQSSPSIGAQVYDMQFELNEIEARREQYPSTISFLNLINALIAEERDLTDRGRRFIGIFRFIYDHVFGPFPQRAYADPCEKWQLVGACLKHFHMILSMYDIKDEDYEGVVDQSRLSTTKESTLLQTQLPVLELLKDFMSGKTAFRNIMSILQPGVNSIVAERSSQIHGQYLENAVQLSLEIIILVLEKDLLLSDYWRPLYQPLDNILSHDHNQIVALLEYVRYDFQPKVQQSSIKIMSILSSRMVGLVQLLLKFNASNSLIEDYAACLEARSEESQIVENNNDDPGILIMQLLIDNISRPAPNITHLLLKFDLDTPVERTVLQPKFYYSCMKVILDILEKLLKPDVNALLHEFGFQLLYELCTDPLTSVPTMDLLSNKKYQFFVKHLDTIGITPLPKRNSNQPLRISSLHQRAWLLKLLAVELHAGDVSNPHHRDACQTILSNLFGQGTTGIDGGQAIYPLSHPDTFGNADFRSFSKSKVLELLDIIQFRCPDSTNKLLNTVAGMKYDLLAEDILGNSGKGGVYYYSERGDRLIDLASFNDKLWQKYNSAYLQISNLGNEVELNDVRETIQQLLRWGWKYNKNLEEQASQLHMLTAWSQIVEVSASRRLTMLEDRSEILFQILDASLSASASPDCSLKMAFILSQVALTCMAKLRDERFMFPGSLSSDNITCLDLIVVKQLSNGACLTILFKLIMAILRNESSEALRRRQYALLLSYFQYCLNVVDPDVPTSVLQFLLLSEQDNEYIDLQKIDKEQAELAHANFSTLRKEAQSILDLVIKDATHGSDPGKTISLYVLDALICIDHDRYFLSQLQSRGFLRSCLTAISNISNQDGGLSLDSLQRACTFEAELAVLLRISHKYGKSGAQVLFTMGTLEHLSSGRATNSQGGLRWVETRLRRDMAVDVDRQQMIITPVLRLVFSLTSLVDTSDYMEVKNKIVREVIDFVKGHQSLFDQVLRLEIAEADELRMEQINLVVGILSKVWPYEESDEYGFVQGLFGLMRALFSRDSNSKLPGFTRSRVLPENQRSSELQIFKLCFSLSSYLYFLVTKKSLRLQSSDSSSNYPTSMELQQPTLSLLNSLLTSVTNALERAADEKSLLLNKIRDINELPRQEVDEIISMCVQQESVSSSDNIQRRRYIAMLEMCRVVACRDQLIILLLPLSEHVLNIILIHLQDSSDAFESTMTAKTITYGAKYDPQQDFALLCGQLVPTLERLELLSEEKLGHNLKVFCRLATSAKEIAIQKMI 1884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01527 1884 Coils Coil 1727 1747 - -
Car01g01527 1884 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 11 1692 IPR021827 GO:0005643
Car01g01527 1884 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 11 1692 - -
Car01g01527 1884 Pfam Nuclear pore complex scaffold, nucleoporins 186/192/205 25 1618 IPR021827 GO:0005643
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01527 Car-Chr1 30733775 30772237 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01527 K14310 - gmx:100777616 3164.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01527 01 30733775 30772237 Car01g01527 01 30733775 30772237 ECH