Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01491 ATGCGGAGGGTTCGGACAAGAAGAAGGAGCAAAGCGAAGCAGCCCGAACGAGAAGGCTTTGGGATGCGGAGGAACGAGACGGGCTTTGGGATGCGGAGGAGCTTAGGGCTTAGGGCTCATACGATTCGGATAAGAAGAAGGGAGGGAAGAAGGCGATTCGGACAAGAAGACGATTCAGACAAGAAGAAGGGGTTAGGGCTCATACGATTTCTGGATGAAGGAGGAATGGTTTGGGATATGGGAAAGAAGGTTTGGTTGAGAGAGGCAGAAAGAGGGTTGGAGTATTTTGGTTGTGGTTGGGAGAAATTTTGTGGGGAGAGTAGTAGATTGGCAGACAAAGGCGAGATGAAGAAAGCTTTTGGATTAGCAAAATTTCATGGCGATTATAAGGCGTTGGAGGCTGCAATTGTTAAGGCAACCAACTATTACCATGCATTGCCAAAGGAAAAGCACATTCGATATATTTTCCAATCACTTTCTCCGTCAAAACCTCGCAGTGAGGTGGCTTATTGTATACATAGTCTTGCAAGGCGTTTGAACCAAACTAACAATTGGGCTGTTGTTTTGAAAACCCTTATTATTATACATCGTGCAATGAGGGAACTTGATAATACAGTTTTGGAAGAGCTTGTTAATTATACAAAAGGAAGAGGTCATTTGATTGATCTATCACAATTTCATGATGCCTCACTCCCAAATGCCTTGGATTATTCTGTTTGGATACGTAATTACGGTCTCTACCTTGAAGAGCGCCTACGATGTTTTGTCATAGTCAACCATGATGTCGCAGCTTATAACTCAAAATATTCCCAAAAGCTTGACACCAAGGAATTACTGGAACAATTGCCTGCCCTACAAAATCTTCTCTTTCGGCTTCTTGATTCCAAGCCAGGGGGTGCATCTGCATTTAATCGTTTGATTCAATATGCCCTTTCAATTATTGCTGGTGAAAGCGTTAAACTATATGTTGCAATAACTGTTAGAGTGGTGGAATTACTTGACAAGTTTTTTGAGATGAACCGTGATGATGCGATTAGTGCACTAAAGATTTATAAGAAATCAGGAAGCCAGGCAGAGAGGTTATCTGCATTCTTTGAGACCTGTCGGGGCCTAGACTTTGCAAGGGGGCAAAAATTCATCAATATTAAACAGCCTCCTGCTTCCTTTATAACGACCATGGAAGATTATATTAAGGAGGCTCCCAACACATTGATGCTTGAGTATAACGTGAATGGTGAAGGCGAAGGAAGTACTTGTAATGAAGATACAGTTCATATAGGCGATTTGTTGAGTGTAAATGAGTTAGATTCTTCTCTAGAAAATAATGAGGCTACAACACCACCACCACAAGCAGCTGATCTTATGGGTTTGTATGATTTACTAACAGGTGCATCTGAATTTGATGAAAATCCCCTAGCATTGGCAGTTGTTCCAACTGAAAATTCTTTAAATTCAAGCAATGATGAGAAGGAAGACAGTCCAATAACAGGTTGGGAGGTTGCACTTTTTACAGAGTCACAAGTCTCTGATCAAAATGAAGTTGCAGAGAGTAAAAAGGATGATGAATTAGACGTGTTAAAACTTGAGGGTTTATATGGTGAAGCTGTTGTTGGAGCACAACATGATGGAGGTTACCAGATAGGCCAAGTGAACTCCAATCCTTTTGACTTTCATGATGCAGCCCAGTACCACATGGCATTGGCACACCCGAGTGTTTTCTCTGTTCCTTCTAACATTCCACCCCAAATTGTAGGCATGCAACCCTACCAAGATTCTTATAATAACGCTCAACAACTGCAGGAGGAGGAACCATTCGTAACAATGATTAAAAAATCGACAAATCCATTTGATGAACCAAATATTTTGCCACCAGCTTCAGCCTCGGCAATGCCATCACACCCTACTTAG 1908 0.4182 MRRVRTRRRSKAKQPEREGFGMRRNETGFGMRRSLGLRAHTIRIRRREGRRRFGQEDDSDKKKGLGLIRFLDEGGMVWDMGKKVWLREAERGLEYFGCGWEKFCGESSRLADKGEMKKAFGLAKFHGDYKALEAAIVKATNYYHALPKEKHIRYIFQSLSPSKPRSEVAYCIHSLARRLNQTNNWAVVLKTLIIIHRAMRELDNTVLEELVNYTKGRGHLIDLSQFHDASLPNALDYSVWIRNYGLYLEERLRCFVIVNHDVAAYNSKYSQKLDTKELLEQLPALQNLLFRLLDSKPGGASAFNRLIQYALSIIAGESVKLYVAITVRVVELLDKFFEMNRDDAISALKIYKKSGSQAERLSAFFETCRGLDFARGQKFINIKQPPASFITTMEDYIKEAPNTLMLEYNVNGEGEGSTCNEDTVHIGDLLSVNELDSSLENNEATTPPPQAADLMGLYDLLTGASEFDENPLALAVVPTENSLNSSNDEKEDSPITGWEVALFTESQVSDQNEVAESKKDDELDVLKLEGLYGEAVVGAQHDGGYQIGQVNSNPFDFHDAAQYHMALAHPSVFSVPSNIPPQIVGMQPYQDSYNNAQQLQEEEPFVTMIKKSTNPFDEPNILPPASASAMPSHPT 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01491 635 MobiDBLite consensus disorder prediction 1 24 - -
Car01g01491 635 Pfam ANTH domain 132 399 IPR011417 GO:0005543
Car01g01491 635 MobiDBLite consensus disorder prediction 612 635 - -
Car01g01491 635 SUPERFAMILY GAT-like domain 269 399 - -
Car01g01491 635 ProSiteProfiles ENTH domain profile. 124 262 IPR013809 -
Car01g01491 635 SUPERFAMILY ENTH/VHS domain 131 256 IPR008942 -
Car01g01491 635 PANTHER CLATHRIN ASSEMBLY PROTEIN 119 619 IPR045192 GO:0048268|GO:0072583
Car01g01491 635 SMART enth_2 130 262 IPR013809 -
Car01g01491 635 CDD ANTH_N 132 255 - -
Car01g01491 635 Gene3D - 110 262 IPR008942 -
Car01g01491 635 Gene3D ANTH domain 264 409 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Car01g01491 635 PANTHER CLATHRIN ASSEMBLY PROTEIN 119 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01491 Car-Chr1 26606101 26620485 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01491 K20043 - ncol:116250878 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01491 01 26606101 26620485 Car01g01491 01 26606101 26620485 ECH
Car07g00722 07 6308485 6314827 Car01g01491 01 26606101 26620485 PCT