Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01487 ATGAAAGGTCATCGGCAGAGAGGTCACAACCGGAGGAGAACGACGTCTTCACGATTGGTGAAGTTCGAGGACTTGCCGGAATATCTGAAAGACAACGAGTTCATATTGGATAATTACCGGTCGGAATGGTCGGTGAAGGATGCTATGCTGAGCGTTTTCGCGTTGCACAACGAAACGCTAAATGTTTGGACGCATTTGGGAGGGTTTTTTATTTTTGCGGCGATGGCGGTGATGAGCTTGCCGGCGGGGGTAACCACGATGGAACTCGGAGGAGGCGGTTTTCTTTCAAATATTTACAGAGTAGGGGCGATGGGGTTGTTGAGGACGCGAATTCAGATCAACGGTTCTGCGTCTCAAAACACACGGGTTCAAGTCTTTCAAGATTTTCATTTGAAACAAATTTTGGAAGTATCGATCTTTGACGGGGTGAGAGAATATGGAATTCCAAGATGGCCATGGTTCATTTTCTTAGGTGGAGGAATGTGTTGCTTAGCTTGTAGTTCTGTTTCCCATCTTTTGGCTTGCCACTCCAAACGCTTTAACCTGTTTTTTTGGCGTCTAGATTATGCTGGAATATCAATTATGATAGTATGCTCCTTCTATGCTCCAATTTACTATGTATTTTTCTGCAATCCTTACGCAAAGTTAATCTATTTGACATCAATATCAGTTTTTGGAGTAGCGGCAATAATTACCCTTCTTGCCCCATCATTTTCAATACCTCATTTTCGAAGATTTCGAGCATCTTTATTCCTTTCAATGGGGTTTTCAGGTGTTGTTCCAGCAGTCCATGCTCTTGTAAGCAATTGGGGTCACACGCATATTCTAGTTGCAATTGGGTATGAGTTCTTAATGGCCATTCTATATGCCACAGGTGCTATGTTTTATGTCACTAGAATACCAGAGCGATGGAAGCCTGGAGCATTTGATATTGCTGGACACAGCCATCAAATTTTTCATGTTTTTGTTGTTCTTGGGGCGCTTGCACATGCCATTGCTACACTTGTCATAATGGATTTTCGAAGGGGATCACCCACATGTGCATTTTAG 1050 0.4314 MKGHRQRGHNRRRTTSSRLVKFEDLPEYLKDNEFILDNYRSEWSVKDAMLSVFALHNETLNVWTHLGGFFIFAAMAVMSLPAGVTTMELGGGGFLSNIYRVGAMGLLRTRIQINGSASQNTRVQVFQDFHLKQILEVSIFDGVREYGIPRWPWFIFLGGGMCCLACSSVSHLLACHSKRFNLFFWRLDYAGISIMIVCSFYAPIYYVFFCNPYAKLIYLTSISVFGVAAIITLLAPSFSIPHFRRFRASLFLSMGFSGVVPAVHALVSNWGHTHILVAIGYEFLMAILYATGAMFYVTRIPERWKPGAFDIAGHSHQIFHVFVVLGALAHAIATLVIMDFRRGSPTCAF 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01487 349 Pfam Haemolysin-III related 53 330 IPR004254 GO:0016021
Car01g01487 349 PANTHER HEPTAHELICAL TRANSMEMBRANE PROTEIN 2 9 342 - -
Car01g01487 349 PANTHER ADIPOR/PROGESTIN RECEPTOR-RELATED 9 342 IPR004254 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01487 Car-Chr1 26429826 26433096 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01487 K07297 - gmx:100809900 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01487 01 26429826 26433096 Car01g01487 01 26429826 26433096 ECH
Car07g00717 07 6269554 6273050 Car01g01487 01 26429826 26433096 PCT