Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01481 ATGGCATACCTTGCAGCAGTCTCCTCTACTTTCACTACTACTTCACTTCTCTATCCTTCATCCTGCTGTTTCTCCTCTCGTCTCTTTCTCAGAACATTAGCTCTTAGGTCCACGCAGTCACCACTTCGTCTTTCTTTCACTTCTGCAGTACCTTTCCGCAACCTCATGGCCCGCGCCAGTCTCGGCCTCACTCACCCCGCCAACACCCAAACCCCAAAGGTCTCTTTTACGGCGAAGGAAACCGACGTGGCGGAATGGAAAGGGGACCTATTAGCAGTTGCTGTGACGGAAAAGGACGTGGCTAGGGACGGTGACTCGAGATTCCAAAATCCGATTTTGAGCGCGCTGGATTTCAAGTTGGGCGGTCTATTAGCCGAAGCCTCATCCGAAGAGGACTTCACCGGAAAACTCGGACAGTCAACGGTTCTCCGAATTGCCGCTGGACTTGGATCCAAGAGAGTCGCATTGCTCGGCCTTGGCGCATCCGCCTCGGGTCCGGCCACCTTTAAAAGCCTCGGCGAGGCTGTTGCTGCTGCTGCTAAGTCCGCACAGGCCGCCCATGTCGCCGTTGTTCTAGCCTCTTCTCAAGGACTCTCTGCCATTAACACCGCTTCTGCAATTGCCACTGGGACCGTGCTGGGAACATTTGAGGATAACAGGTACAAGTCAGAGTCGAAGAAAACGGCCCTTAAATCCGTTGATATCATTGGTCTTGGAACAGGGCCCGATTTGGAGAAGAAACTGAAGTATGCAGGAGACGTTTCTTCTGGAATCCTTCTTGGAAGGGAGCTTGTAAATTCTCCGGCTAATGTGCTCACACCAGGAGTATTGGCAGAAGAAGCATCTAAGATTGCTTCAACATACAGTGACGTGTTTACTGCCAAAATATTGGATGCTGAACAATGTAAGGAATTGAAAATGGGGTCTTATCTGGCTGTTGCTGCAGCCTCAGCAAATCCTCCTCAGTTTATTCATCTGTGCTATAAACCACCAAGTGGACCTGTCAATGTCAAGTTAGCGTTAGTTGGAAAAGGCTTGACTTTTGATAGTGGTGGCTACAACATCAAGACAGGACCTGGCTGTATGATTGAGCTGATGAAATTTGATATGGGTGGATCTGCTGCAGTTTTTGGAGCAGCTAAAGCTCTTGGTCAAATCAAACCTCTTGGAGTGGAGGTTCATTTTATAGTCGCAGCTTGTGAGAATATGATAAGTGGAACAGGTATGAGGCCAGGAGACGTTGTCACAGCTTCAAATGGAAAAACTATAGAGGTTAACAACACAGATGCTGAGGGTAGGCTAACTCTGGCAGATGCTCTGGTGTATGCTTGTAACCAAGGTGTTGATAAGATAATTGACCTGGCAACATTAACTGGGGCATGTATAATTGCACTAGGACCCACTATTGCAGGCGTGTTTACACCCAGTGATGACCTAGCTAAAGAAGTTTTTGATGCTTCTGAAGTGAGTGGAGAAAAACTATGGAGGTTGCCAATAGAAGAAAGTTACTGGGAATCAATGAAATCAGGAGTTGCTGATATGGTGAATACTGGTGGTCGACAAGGTGGTGCTATCACTGCCGCTCTATTCTTAAAGCAGTTTGTTGATGAAAAGGTGCAATGGATGCATATCGACTTGGCTGGTCCTGTGTGGAATGAAAAGCAGCGGTGTGCAACAGGATTTGGTGTATCGACTTTGGTGGAATGGGTATTGAGGAATGCATCTTAA 1728 0.4769 MAYLAAVSSTFTTTSLLYPSSCCFSSRLFLRTLALRSTQSPLRLSFTSAVPFRNLMARASLGLTHPANTQTPKVSFTAKETDVAEWKGDLLAVAVTEKDVARDGDSRFQNPILSALDFKLGGLLAEASSEEDFTGKLGQSTVLRIAAGLGSKRVALLGLGASASGPATFKSLGEAVAAAAKSAQAAHVAVVLASSQGLSAINTASAIATGTVLGTFEDNRYKSESKKTALKSVDIIGLGTGPDLEKKLKYAGDVSSGILLGRELVNSPANVLTPGVLAEEASKIASTYSDVFTAKILDAEQCKELKMGSYLAVAAASANPPQFIHLCYKPPSGPVNVKLALVGKGLTFDSGGYNIKTGPGCMIELMKFDMGGSAAVFGAAKALGQIKPLGVEVHFIVAACENMISGTGMRPGDVVTASNGKTIEVNNTDAEGRLTLADALVYACNQGVDKIIDLATLTGACIIALGPTIAGVFTPSDDLAKEVFDASEVSGEKLWRLPIEESYWESMKSGVADMVNTGGRQGGAITAALFLKQFVDEKVQWMHIDLAGPVWNEKQRCATGFGVSTLVEWVLRNAS 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01481 575 SUPERFAMILY Zn-dependent exopeptidases 256 572 - -
Car01g01481 575 ProSitePatterns Cytosol aminopeptidase signature. 427 434 IPR000819 GO:0006508|GO:0070006
Car01g01481 575 Gene3D Leucine Aminopeptidase, subunit E, domain 1 49 244 IPR043472 -
Car01g01481 575 SUPERFAMILY Macro domain-like 75 257 IPR043472 -
Car01g01481 575 PANTHER LEUCINE AMINOPEPTIDASE 2, CHLOROPLASTIC-RELATED 48 575 - -
Car01g01481 575 CDD Peptidase_M17 105 570 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Car01g01481 575 Pfam Cytosol aminopeptidase family, N-terminal domain 93 224 IPR008283 GO:0006508|GO:0070006
Car01g01481 575 Hamap Probable cytosol aminopeptidase [pepA]. 76 575 IPR023042 -
Car01g01481 575 Gene3D Zn peptidases 245 575 - -
Car01g01481 575 Pfam Cytosol aminopeptidase family, catalytic domain 261 567 IPR000819 GO:0006508|GO:0070006
Car01g01481 575 PRINTS Cytosol aminopeptidase signature 339 356 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Car01g01481 575 PRINTS Cytosol aminopeptidase signature 363 384 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Car01g01481 575 PRINTS Cytosol aminopeptidase signature 401 422 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Car01g01481 575 PRINTS Cytosol aminopeptidase signature 423 443 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Car01g01481 575 PRINTS Cytosol aminopeptidase signature 451 466 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Car01g01481 575 PANTHER LEUCINE AMINOPEPTIDASE-RELATED 48 575 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01481 Car-Chr1 25873233 25892871 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01481 K01255 - gmx:100808230 924.465