Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01465 ATGGCAATTGGGTCTTTGACAACAGCCGCTGTGACCAAAGAAAGGGCAGAGCAGTATAAAGGGAGAGTCACTCCTTATGTTATCATTGCTTGCATTGTTGCTGCTACAGGAGGGTCACTTTTTGGCTATGATATTGGAATTTCAGGTGGTGTTACTTCCATGGACGACTTCCTTAAAGAATTCTTCCCCACAGTATACAGGCAAAAAATGCATGCACATGAAAACAACTACTGCAAGTATGACAATCAGGGCCTTGCAGCATTTACCTCGTCTCTTTACATTGCCGGTTTAGTTGCATCCTTGGTTGCATCTCCCATTACACAGAAGTATGGACGTCGAGCGAGTATCATAGGCGGTGGTATCAGCTTTCTGATTGGATCAGCTCTAAATGCTTCAGCTGTTAACCTGGTAATGCTGATAATTGGCCGTGTTATGCTCGGCGTTGGCATCGGATTCGGAAATCAGGCAATTCCGCTTTATTTGTCAGAGATGGCACCAACCCACCTGCGAGGAGGCTTAAACATGATGTTTCAAGTTGCAACAACTTTTGGGATTTTCACAGCCAATATGGTGAACTTTGGAACACAGAATATTAAACCTTGGGGATGGAGACTGTCCTTAGGCTTGGCTGCAGTGCCAGCTCTTCTAATGACGATCGGAGGAATATTTCTTCCCGAGACTCCAAATAGCTTAATCGAACGAGGATCGAAAGAAAGAGGAAGGAAGCTCCTAGAAAAGATAAGAGGAACTAGTGAGGTTGATGCAGAGTTTCAAGATATGGTTGATGCAAGCGAGTTGGCTAATTCGATAAAGCATCCGTTTAGTAACATCCTTGAAAGAAGGTATAGGCCAGAGTTGGTTATGGCAATTGTCATGCCTACTTCTCAGATTTTGACTGGTATAAATTCAATTCTGTTCTATGCTCCAGTGCTGTTTCAAAGCATGGGATTTGGAGGAGATGCATCACTCTACTCCTCAGCTTTGACTGGAGGTGTTCTTGCTTTCTCAACATTCATTTCCATTGCAACAGTTGATAAATTGGGAAGGAGAGTTCTTCTTATTAGTGGTGGAATACAAATGATCATTTGTCAGCAGATTATAGTTGCCATAATTCTTGGAATCAAGTTTGGAGATAACCAGGAACTGTCGAAAAGCTATTCAATATTGGTTGTAGTTGTGGTTTGCCTATTTGTTGTAGAATTTGGATGGTCATGGGGCCCACTTGGGTGGACAGTACCAAGTGAGATATTTCCATTAGAAATTCGATCAGCAGGGCAGA 1279 0.4285 MAIGSLTTAAVTKERAEQYKGRVTPYVIIACIVAATGGSLFGYDIGISGGVTSMDDFLKEFFPTVYRQKMHAHENNYCKYDNQGLAAFTSSLYIAGLVASLVASPITQKYGRRASIIGGGISFLIGSALNASAVNLVMLIIGRVMLGVGIGFGNQAIPLYLSEMAPTHLRGGLNMMFQVATTFGIFTANMVNFGTQNIKPWGWRLSLGLAAVPALLMTIGGIFLPETPNSLIERGSKERGRKLLEKIRGTSEVDAEFQDMVDASELANSIKHPFSNILERRYRPELVMAIVMPTSQILTGINSILFYAPVLFQSMGFGGDASLYSSALTGGVLAFSTFISIATVDKLGRRVLLISGGIQMIICQQIIVAIILGIKFGDNQELSKSYSILVVVVVCLFVVEFGWSWGPLGWTVPSEIFPLEIRSAGQ 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01465 426 Pfam Sugar (and other) transporter 31 426 IPR005828 GO:0016021|GO:0022857|GO:0055085
Car01g01465 426 Gene3D MFS general substrate transporter like domains 19 426 IPR036259 -
Car01g01465 426 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 4 426 IPR045262 GO:0015144
Car01g01465 426 TIGRFAM SP: MFS transporter, sugar porter (SP) family 19 426 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car01g01465 426 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 426 IPR020846 GO:0022857
Car01g01465 426 ProSitePatterns Sugar transport proteins signature 2. 145 170 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car01g01465 426 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car01g01465 426 PRINTS Sugar transporter signature 391 412 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car01g01465 426 PRINTS Sugar transporter signature 414 426 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car01g01465 426 PRINTS Sugar transporter signature 38 48 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car01g01465 426 PRINTS Sugar transporter signature 140 159 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car01g01465 426 CDD MFS_STP 33 426 IPR044778 GO:0015145|GO:0015749
Car01g01465 426 ProSitePatterns Sugar transport proteins signature 1. 340 357 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car01g01465 426 SUPERFAMILY MFS general substrate transporter 20 425 IPR036259 -
Car01g01465 426 PANTHER - 4 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01465 Car-Chr1 25194460 25198118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01465 1 426 Organic Solute Cotransporters AT4G02050 79.812 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01465 K24193 - gmx:100820434 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01465 01 25194460 25198118 Car01g01465 01 25194460 25198118 ECH