Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01442 ATGGCGAAATTGAAGATAGCAGGGACATGGTCAGGTGTGTTAGAAGAAGTCGATTTAGAGCGTATGATCATATCTTCACTACGTGAAGAAATTGCTAAACGATCTAATTGCGAAAACCCTCACTTCATCAACCTCATATGTGCTGGTAGAATTCTCAAGGAAGAAAATGGAACCCTAACGTTATCACAATTGGGTATAAAAAACAACTCTAAGATCCTCGCTACTCTCTCTTCTCCTCAACAAGGTCATTCTCTTGTTGTTGAAGAACAAAGCTCTCAAAGGCTTGCACGTATCAGGGCAGCTGCAACTGCATTAGCTGTAAGGCATGCAGATGGTTCGTTACCTGTTGAAGACTTTAACATAGAAGTAGAAGATCAAAGTGGACAGAAAGTACGCTTAGGATCAGAGATTGATCAGAGGGCAGTAATGATGGGACTGATGCTTCATGCAAAGGGGAAGCATCTAATCAAAGTGGGAAATTACAAAGATGCACTAGAAGTGCTTAGCATGGGAGAGGAGGCATTCTCTATTTGTGATCCAAAAGTCATTGAGCTTATTGATAATGTTCCAATACTGCAAATAGACATGGTATGGTGCTACTTTATGCTACGAGACATTAGATGGCTATCAGATGCAGGAAAGCGCCTTGAAATGGCTAGGGCAGGAATTGAGCGTGCTCATGGAAAGGATTCTCTCCGTCTCAGACTCTTGCAAGGTGGTCGCTATCCAGAACTTGCATTGCATTTGAGACTAGAGTTGCTTGAAGGGGTTGTGGCATTTCATACTGGCCAGTTGGAGAAATCAAGACAAGCTTTAGCTTCTGCAAGAGCAAAGTTTGTTCAGCTGCAAGTGCCAGATGAAGCCTTATCATTTGTTATGAGCATGGGCTACAATCAACGTGATACAAAGAGAGCATTGCGAATGAACAATCAAGATGTTGGGGGTGCCATTGATTTCCTTGTTGAGGAGAAGGCAAAGAAAATGCAAAAAATGGAGGAAGATTTAAAAAGAAAAGAGGAAATTAGGGAGCAAAAGCGGTATGGCGTGACCCCTTTAAAGAAGGCCGTGGATCTTGAGAGATTGAAGGAATTGGTCACTATTGGGTTTGACAAGGAGCTTGCTGCTGAAGCCCTTAGAAGAAATGAAAACGATACTCAAAAGGCATTGGACGATTTGACGAATCCAGAAATTAATTCTGATTTACAGGTTAAGATCGAGTCAAGGAAAAGGAAACGAAAGAAACAAGCAACAGATTCTGCAATTGAAAAAGTTGTGCAAATGGGTTTTGAAAGATCAATAGTGGTTGCTGCTTTTGAGGCAGGCGGCACTTTAGAAGAAGTATTGCAAAAGCTGACAGCACAACCTGAGACTGACCCTGCATCAGCTGCGGAAAGGAATTCAATAGCTGCTTCCCATGGCAGTGGAAGTTCATCTAACCCTTTACCGGACGATGTTGGTTCTGATATTCTAGACCTAATGAATGAGGTTGAAGATAACAAAAAAGCAGAAGAAAGGGACGTGGAAATGGAAGATGAGCTATCTGCAGATATAGCTAAAGGCGATGCATTGACTGATTATGACATTGAAGTTACTATAGAAGGGGAAGCCATAACTGAGTACCTCTCTATGGTTGAGTCAGCAGGCAGCTGTGAGAAAATGGTTACTTCCAATTAA 1674 0.42 MAKLKIAGTWSGVLEEVDLERMIISSLREEIAKRSNCENPHFINLICAGRILKEENGTLTLSQLGIKNNSKILATLSSPQQGHSLVVEEQSSQRLARIRAAATALAVRHADGSLPVEDFNIEVEDQSGQKVRLGSEIDQRAVMMGLMLHAKGKHLIKVGNYKDALEVLSMGEEAFSICDPKVIELIDNVPILQIDMVWCYFMLRDIRWLSDAGKRLEMARAGIERAHGKDSLRLRLLQGGRYPELALHLRLELLEGVVAFHTGQLEKSRQALASARAKFVQLQVPDEALSFVMSMGYNQRDTKRALRMNNQDVGGAIDFLVEEKAKKMQKMEEDLKRKEEIREQKRYGVTPLKKAVDLERLKELVTIGFDKELAAEALRRNENDTQKALDDLTNPEINSDLQVKIESRKRKRKKQATDSAIEKVVQMGFERSIVVAAFEAGGTLEEVLQKLTAQPETDPASAAERNSIAASHGSGSSSNPLPDDVGSDILDLMNEVEDNKKAEERDVEMEDELSADIAKGDALTDYDIEVTIEGEAITEYLSMVESAGSCEKMVTSN 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01442 557 SUPERFAMILY UBA-like 258 323 IPR009060 GO:0005515
Car01g01442 557 CDD UBA 361 390 - -
Car01g01442 557 Gene3D - 358 395 - -
Car01g01442 557 SMART uba_6 285 322 IPR015940 -
Car01g01442 557 SMART uba_6 417 453 IPR015940 -
Car01g01442 557 SMART uba_6 357 394 IPR015940 -
Car01g01442 557 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 355 395 IPR015940 -
Car01g01442 557 MobiDBLite consensus disorder prediction 453 487 - -
Car01g01442 557 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 24 547 IPR039749 -
Car01g01442 557 SUPERFAMILY Ubiquitin-like 22 79 IPR029071 -
Car01g01442 557 Gene3D - 15 84 - -
Car01g01442 557 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 283 323 IPR015940 -
Car01g01442 557 Coils Coil 492 513 - -
Car01g01442 557 Gene3D - 261 338 - -
Car01g01442 557 SUPERFAMILY UBA-like 353 398 IPR009060 GO:0005515
Car01g01442 557 Coils Coil 321 344 - -
Car01g01442 557 MobiDBLite consensus disorder prediction 467 483 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01442 - - gmx:100792972 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01442 01 23646903 23656268 Car01g01442 01 23646903 23656268 ECH