Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01439 ATGAGGTCATTGTTATTGTTGTTGATTGCCTTGTCTTTCAGCTACGTCTTTGCGGAACACATCTTCCCTGTTCATATCGGTAGCATATTtggtggtggtggtggcggcggcagtagtggAAGTTCTCGTGAACCGAAATACAAGATTGAATTCCACCCCGAAGATTCCCCTTTTCACCCTGATGATGACCAGGAATCTATAGTCGTACCGGATAAAAATGGACATAAATTTATTTGTTACTTGCCTAAGGTGGAAAAGGAAAAGAGTGGAAAGCCTGTTATGCAGCACAACGTTAGCAGCATGATTGTTGAAACTGAGAAAAGGATTAAACAGAAGACACCAGATGAACTGTTAGAAGTATTGAAGGGTCCATGCTTTATCAGACAAGAAGGTTGGTGGTCCTATGAGTTTTGCTATCAAAAGAAGTTGCGACAACTACATTTGGAGGATGACAAGGTAGTCCAGGAGTTTGTCTTGGGAGTGTATGATCCGGAGGCAACAGCTGCAATTAACCAAAATCTTTCTGACATTTCTACATTGAAGGATCCTCGCTCAAAGGATGCCTCACAAAGGTACCATGCTCACCAATATACTAATGGAACCACATGTGATCTAACAAATAAGCCAAGAGAGACTGAGGTGAGGTTTGTATGCTCAGAACCCAGGGCAATGATCAGTTCAATCACAGAGATTTCAACTTGCAAGTATGCACTTACAGTTCAAGTCCCTACGCTATGCAAGCACCCATTGTTTCAAGAGGAGAGACCGATATGGCACACCATCGACTGTAATGTGCTTCCAAAGGATTACAAGTATACTAAAGTGAGACAAGATAACAGAGATGCGGATATTGTTATGGTTACAGATTCAGAAACTAATGATTCAGAACAATGA 894 0.396 MRSLLLLLIALSFSYVFAEHIFPVHIGSIFGGGGGGGSSGSSREPKYKIEFHPEDSPFHPDDDQESIVVPDKNGHKFICYLPKVEKEKSGKPVMQHNVSSMIVETEKRIKQKTPDELLEVLKGPCFIRQEGWWSYEFCYQKKLRQLHLEDDKVVQEFVLGVYDPEATAAINQNLSDISTLKDPRSKDASQRYHAHQYTNGTTCDLTNKPRETEVRFVCSEPRAMISSITEISTCKYALTVQVPTLCKHPLFQEERPIWHTIDCNVLPKDYKYTKVRQDNRDADIVMVTDSETNDSEQ 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01439 297 SUPERFAMILY Mannose 6-phosphate receptor domain 189 247 IPR009011 -
Car01g01439 297 Gene3D - 122 242 IPR009011 -
Car01g01439 297 PANTHER OS-9-RELATED 25 279 IPR045149 GO:0030433|GO:0030968
Car01g01439 297 PANTHER PROTEIN OS-9 25 279 - -
Car01g01439 297 ProSiteProfiles MRH domain profile. 123 248 IPR044865 -
Car01g01439 297 Pfam Glucosidase II beta subunit-like protein 124 203 IPR012913 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01439 Car-Chr1 23560961 23565935 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01439 K10088 - gmx:100803528 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01439 01 23560961 23565935 Car01g01439 01 23560961 23565935 ECH