Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01435 ATGGGTTATCGGGTTCAGCTTCTGGGTATGTACTATTTGGCATGCTTCAGCTTTGTTGTTATGAGCACAGTGAGTGAAACAAGAGATAATAAAACTGTGATGAAAGGGAGTGTTATCATTGATGGAAACTCTGTGATTGGAAATATTGATGATGATTTTGTTTGTGCAACTTTGGATTGGTGGCCCCCTGAGAAATGTGATTATGGTAGATGTAGTTGGGGTCTTGCTTCTCTTCTAAATCTGGACCTCAACAACAAGATTTTTTTAAATGCAGTGAAAGCCTTTTCACCATTGAAACTGAGATTAGGTGGGAGTTTGCAAGATAAGGTGATATATGGGACTGAAGATTACAACCAACCTTGCACTCCTTTTATTAGAAAAGAATCCGAAATGTTTGGATTCACACAAGGTTGCCTCCCAATGCCAAGATGGGATGAACTTAATGATTTCTTCCAAAAAGCAGGGGCTAAGGTTGTCTTTGGATTGAATGCACTTACTGGAAAGTCAATACATTCTGGTTCTGCAACAGGACCTTGGAACTACACCAATGCTGAATCGTTTATTCAATACACTGTTGGAAAGAACTATGCCATTCATGGATGGGAACTTGGCAATGAATTGAGTGGCAGTGGAGTTGGAACAAGTATTTCTGCAGACCAATATGCTTCTGATTTTGCGGCCTTAAGAGACATAGTTCAAAATGCATATAGAGACTTTGATCCTAAGCCATTAGTCATTGCTCCTGGAGGTTTCTTCGATGCAACTTGGTTCAAAGAATTTATAAGCAAATCTGGTAAATCTTTGGATGTGGTCACTCACCACATTTATAATCTTGGACCAGGTGTTGATGAACACCTTGTGGAAAAAATTCTGAATCCTTCTTATCTTGATGGAGAGAAAAGTACATTCAAAGGCCTGAAAGATATACTTGAAAGTACAGCAACCTCAGGAACAGCATGGGTTGGTGAGTCGGGAGGGGCTTATAACAGTGGACATCATATGGTATCCGATGCATTTGTGTACAGTTTCTGGTATTTGGATCAACTTGGCATGTCGGCCGCTTACGACACGAAAACATATTGCAGACAGAGTTTGATAGGAGGAAACTATGGTTTACTCAATACTACCAACTTCCTTCCAAATCCAGACTACTATAGTGCTCTTCTTTGGCACCGACTCATGGGTAGACATGTACTATCAACTACCTTCTCGGGGACAAACAAGATACGAGCTTATGCACACTGCGCAAAGCAATCCAAAGGAATCACCATACTATTGATCAACCTAGACAACAGCACAAATTTTGAAGTGACCTATAGCAACACTAAGAGTTTGTGGCACAGAAAGATGTCTGATAATTCAAAAATAATGAAACTACCTCTTCATAGTTCAAGTGTAACAGCAAGAGAAGAGTACCATCTAACTCCACAAGATGGAAATATTCATAGCCAAATCATGGTATTGAATGGAAATGTTTTATCTATAAACTCAGATGGTGATATCCCTCCTTTGGAGCCTCTATATGTAAACTCATCAAAGCCTATAACAGTTGCTCCTTTTTCCATTGTATTTTCTCATATACCTGATGCTGTTGTTCCGGCTTGCGGCTAG 1611 0.3979 MGYRVQLLGMYYLACFSFVVMSTVSETRDNKTVMKGSVIIDGNSVIGNIDDDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKIFLNAVKAFSPLKLRLGGSLQDKVIYGTEDYNQPCTPFIRKESEMFGFTQGCLPMPRWDELNDFFQKAGAKVVFGLNALTGKSIHSGSATGPWNYTNAESFIQYTVGKNYAIHGWELGNELSGSGVGTSISADQYASDFAALRDIVQNAYRDFDPKPLVIAPGGFFDATWFKEFISKSGKSLDVVTHHIYNLGPGVDEHLVEKILNPSYLDGEKSTFKGLKDILESTATSGTAWVGESGGAYNSGHHMVSDAFVYSFWYLDQLGMSAAYDTKTYCRQSLIGGNYGLLNTTNFLPNPDYYSALLWHRLMGRHVLSTTFSGTNKIRAYAHCAKQSKGITILLINLDNSTNFEVTYSNTKSLWHRKMSDNSKIMKLPLHSSSVTAREEYHLTPQDGNIHSQIMVLNGNVLSINSDGDIPPLEPLYVNSSKPITVAPFSIVFSHIPDAVVPACG 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01435 536 Gene3D Glycosidases 72 392 - -
Car01g01435 536 SUPERFAMILY (Trans)glycosidases 49 394 IPR017853 -
Car01g01435 536 PANTHER HEPARANASE-LIKE PROTEIN 3 11 535 - -
Car01g01435 536 Pfam Glycosyl hydrolase family 79, N-terminal domain 36 350 IPR005199 GO:0016020|GO:0016798
Car01g01435 536 PANTHER HEPARANASE-RELATED 11 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01435 Car-Chr1 23408884 23413249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01435 1 535 Glycoside Hydrolase AT5G61250 47.349 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01435 K07964 - gmx:100802477 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01435 01 23408884 23413249 Car01g01435 01 23408884 23413249 ECH
Car07g00694 07 6096120 6099846 Car01g01435 01 23408884 23413249 PCT