Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01433 ATGGATCTCGACGTAGGGAGTTCATCAACCGTCAGCACAGGAGCACATGCAATTCCAAGATGCCCGACACGACATGGCGCACTCTATCAGTTTACACAGCAGAATCTTCCAGCATGTAAACCTGTCCTTACACCTGCAGCAGTCATTTCTACATTTCTATTGATGGGTTTGATTTTCATTCCTGTTGGACTTGTTACACTTCGTGCGTCGTATAGTGTTGTTGAAATTGTGGACAGATATGACATTGATTGCATACCTGAAGAACATAGAAGTAACAAGGTTGCATATGTAAAAGATGACTCAATCTCTAAAAATTGTTCACGTTTCTTAAAGGTACCTAAGTCAATGAGAGCGCCGGTTTATATCTATTATCAGCTTGATAACTATTACCAGAACCATCGCCGATATGTCAAAAGTAGAAGTGACCGGCAGCTCTTACATGGACTTGAATACAATGATACCGGTTCTTGTAGACCTTTAGAGTCCTCTGATGATCTTCCCATTGTACCTTGTGGGTTGATAGCATGGAGTTTGTTCAACGATACATATAAGTTCAGTCGCGGACCATCAGAATTGAAGGTTAATAGGAAAAACATTGCGTGGAAGAGTGATCGTAATCACAAATTTGGGAAGCATGTTTACCCGTTTAATTTTCAGAATGGTACCTTTACTGGAGGTGCAAAACTGGATCCTAGTATTCCTCTTAGTGATCAAGAAGATCTTATAGTTTGGATGCGGACTGCTGCTCTTCCCACCTTCCGAAAATTGTATGGTAGAATAGAAGAGGATTTGGAGGCTGATGATGTTATAGTAGTCCACCTAAAGAATAACTATAACACTTACAGTTTTGGTGGAAAGAAGAAGCTTGTTCTGTCAACATCAAGCTGGCTGGGTGGAAAAAATGACTTCCTTGGAGTTGCCAATTTATTTGTTGGCACCGTTAGTATATTGATCTCCATCATCTTCTTGTTGCTTCATGTGAAAAATCCTAGACATTATGGCGACACGGCCTACTCATCTTGGAATAGGAAAAGCATTTCTAGCTGA 1047 0.4059 MDLDVGSSSTVSTGAHAIPRCPTRHGALYQFTQQNLPACKPVLTPAAVISTFLLMGLIFIPVGLVTLRASYSVVEIVDRYDIDCIPEEHRSNKVAYVKDDSISKNCSRFLKVPKSMRAPVYIYYQLDNYYQNHRRYVKSRSDRQLLHGLEYNDTGSCRPLESSDDLPIVPCGLIAWSLFNDTYKFSRGPSELKVNRKNIAWKSDRNHKFGKHVYPFNFQNGTFTGGAKLDPSIPLSDQEDLIVWMRTAALPTFRKLYGRIEEDLEADDVIVVHLKNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVANLFVGTVSILISIIFLLLHVKNPRHYGDTAYSSWNRKSISS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01433 348 PANTHER ALA-INTERACTING SUBUNIT 2-RELATED 8 347 - -
Car01g01433 348 PANTHER CELL CYCLE CONTROL PROTEIN 50 8 347 IPR005045 GO:0016020
Car01g01433 348 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 68 331 IPR005045 GO:0016020
Car01g01433 348 PIRSF Lem3/Cdc50 7 344 IPR005045 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01433 Car-Chr1 23358641 23377295 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01433 - - gmx:100789806 622.083