Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01422 ATGGGAGCTAGAAGTCGGCACCttgttttatttttgttgtgtctttccttctgttcagGTATAAGTACATCCATAACATTAAGAGAAGATGAAAATCATGAAATATCATCATATGAATTTAGTACTCAATTGGATTCAATTCCAATTGTCAACCCTACTACACCAGGAACAGGAAATCCATACACAACCCCCACAAGCCCAAACACAACCCCCACAAATCCATACACAGCCCCTACAAATCCAGACACAAATCCAACAAGCCCAACAAACCCATACTCAAACCCAACAAGCCCAACAAATCCATACTCAAACCcaacaagcccaacaaatccatacataaacccaacaacaccaactacaactccaacaagcccaactacaacaactccaacaacaccaaccacTTCATCTGGTGGTGGTCAATGGTGTGTTGCTAGCCAATCAGCTGCAGAGACCACTCTACAAGTAGCTCTTGATTATGCATGTGGATATGGTGCAGATTGCTCACAAATTCAACAAGGAGGAATGTGCTATGACCCTAATACATTGAGAGACCATGCTTCTTATGCATTCAATGATTACTACCAAAAGAATCCTGCACCTACAAGCTGTGCATTTGGAGGAGCAGCAACACTTACAAACAAAGATCCAAGTCATGGGAATTGCCACTATTCATCCTCCAAAACAACAAGCATGAGTCCACCAACATTTGTAAGCCCACCAAATCCACCAACTACACCACCACCAAGTACTATGACTCCAACCACACCAAGTATAATGACTCCATCTACACCAAGCATGACAATGCCTGATCCTGATGGATCATCATCAGTCTATGGTGCACCACCAGGAGGAAGCCCCAATATAGCCACATCTGCTTCTTATTCCATACTTTTGTTACTTACAAGCCTCTGGGCTTCACTTCATGTGGAAAATTACATCTAG 945 0.3714 MGARSRHLVLFLLCLSFCSGISTSITLREDENHEISSYEFSTQLDSIPIVNPTTPGTGNPYTTPTSPNTTPTNPYTAPTNPDTNPTSPTNPYSNPTSPTNPYSNPTSPTNPYINPTTPTTTPTSPTTTTPTTPTTSSGGGQWCVASQSAAETTLQVALDYACGYGADCSQIQQGGMCYDPNTLRDHASYAFNDYYQKNPAPTSCAFGGAATLTNKDPSHGNCHYSSSKTTSMSPPTFVSPPNPPTTPPPSTMTPTTPSIMTPSTPSMTMPDPDGSSSVYGAPPGGSPNIATSASYSILLLLTSLWASLHVENYI 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01422 314 Gene3D - 139 234 - -
Car01g01422 314 PANTHER BETA-1,3 GLUCANASE 7 305 IPR044788 -
Car01g01422 314 MobiDBLite consensus disorder prediction 46 90 - -
Car01g01422 314 MobiDBLite consensus disorder prediction 221 283 - -
Car01g01422 314 MobiDBLite consensus disorder prediction 256 273 - -
Car01g01422 314 Pfam X8 domain 141 211 IPR012946 -
Car01g01422 314 MobiDBLite consensus disorder prediction 106 139 - -
Car01g01422 314 MobiDBLite consensus disorder prediction 236 255 - -
Car01g01422 314 MobiDBLite consensus disorder prediction 46 139 - -
Car01g01422 314 PRINTS Proline rich extensin signature 53 65 - -
Car01g01422 314 PRINTS Proline rich extensin signature 67 88 - -
Car01g01422 314 PRINTS Proline rich extensin signature 95 111 - -
Car01g01422 314 PRINTS Proline rich extensin signature 121 138 - -
Car01g01422 314 PRINTS Proline rich extensin signature 223 248 - -
Car01g01422 314 PANTHER BETA-1,3 GLUCANASE 7 305 - -
Car01g01422 314 MobiDBLite consensus disorder prediction 221 235 - -
Car01g01422 314 SMART X8_cls 141 224 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01422 Car-Chr1 22500937 22503922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01422 84 224 Glycoside Hydrolase AT4G26830 42.105 1.37e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01422 - - lja:Lj6g3v1093470.1 213.772