Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01402 ATGGCTTGCATGAAATTGGGTTCCAAAGCTGATGCATTTCAGCGTCAAGGCCAAGCATGGTTCTGCACGACCGGGCTTCCCAGCGATATAATTGTTGAAGTTGGTGAGATGTCTTTCCATCTTCACAAGTTCCCTTTGCTCTCTAGAAGTGGGGTTTTGGAAAGATTGATTGCCAAAGCTTCTGAATCAGAGGAAGAATGTGTCATAGACCTTCACAACATTCCCGGTGGGGCCAAAACATTTGAACTTGTGGCAAAATTCTGCTACGGTGTGAAACTTGAACTCACGGCATCAAACATTGTGTGCCTATGGTGTGCTTCCGAGCATCTTGAAATGACCGAAGAATATGGCGAAGGTAATCTTATTTCCCAGGCTGAAACCTTTTTTAATCAAGTGGTCCTCCGAAGTTGGAAAGACTCCGTAAGGGCACTTCAAACATGTGATGATGTTCTTGACAAAGCTGAAGAGCTCCACATTGTGAAAAGGTGCCTTGAATCGCTTGCAGCAAAGGCATCTACTGACCCAAATTTATTTGGGTGGCCAGTACTAGAGCGCGGTGGTCCCTTACAGAGCCCTGGTGGAAGTGTTCTGTGGAATGGAATAAGTACCGGGGCAAGACCGAAGAATACAAGTTTAGATTGGTGGTATGAGGATGTAGCAAATTTGAGTTTACCTATTTATAAGAGGTTGATAGCTATCATGGAATCTCGGGGTATTAGGCAGGAAATTATTGCCGGTTCTCTTGCTTTCTATGCTAAAATGTATTTGCCTGGTTTAAATCGACGTAAGGTTTCCGGTGAATCCAGTACTCGGCTAACCCCGGTGGCTTTAGGGTCTCCACCATCTGAAGAAGATCAAATAATTCTCTTGGAAGAGATTGATCAGCTACTCCCGATGCAGAAGGGCCTAGTTCAAACGAAGTTCCTGTTTGGTCTACTTCGAACAGCCATGATTCTACGAGCAAACCCCTCTTGTATATCGAATTTGGAGAAACGGATCGGGATGCAGCTCGATCAAGCTGCTTTGGAAGATCTCTTGATGCCGAATTTCTCGTATTCAATGGAGACACTTTACAATGTTGATTGTGTCCAACGAATTCTTGATCATTTCCTTGCGATTGATCAGGTTACAGGTGGCGCCTCTCCGTGCTCAATTGACGATGGCCAGTTGATTGGATCGCCTTCACTGACACCCATTACCATGGTAGCAAAACTGATCGATGGTTACCTTGCAGAGGTTGCCCCGGATGTGAACTTAAAACTTCCCAAGTTTCAAGCACTTGCTGCTGCTGTTCCGGAGTATGCCAGGCCTTTGGATGATGGTTTATACCGTGCTATAGATATTTATTTGAAGTCTCATCCATGGTTGGTGGAGTCAGAGAGAGAGCAACTATGCAGACTAATGGACTGTCAGAAGCTCTCACTAGAAGCATGCACACACGCCGCACAAAACGAGAGACTGCCCATAAGAATCATAGTTCAAGTTCTATTTTTCGAGCAACTCCAGCTTCGAACATCAATTGCCGGTTGCTTTCTAGTCTCAGACAACCTCGATGGATCAAGAAATTTAAGAAGTGGTTTTGTCGGATCCAACGAGGGAGGCTGGGCGTCGGCCGTGAAGGAAAATCAGATGTGCAGTGCTCAAGAAGAATCTGTTAGTAAACAGAACAATGGAAATAATAAGGTTGAGAAATTGAAGGATAGGCATGTAAAGCACAATAGAAATTCGTCTATTAGTGACAAAGGATCAGTCTCTTCAATTATCCATTCTTAG 1773 0.445 MACMKLGSKADAFQRQGQAWFCTTGLPSDIIVEVGEMSFHLHKFPLLSRSGVLERLIAKASESEEECVIDLHNIPGGAKTFELVAKFCYGVKLELTASNIVCLWCASEHLEMTEEYGEGNLISQAETFFNQVVLRSWKDSVRALQTCDDVLDKAEELHIVKRCLESLAAKASTDPNLFGWPVLERGGPLQSPGGSVLWNGISTGARPKNTSLDWWYEDVANLSLPIYKRLIAIMESRGIRQEIIAGSLAFYAKMYLPGLNRRKVSGESSTRLTPVALGSPPSEEDQIILLEEIDQLLPMQKGLVQTKFLFGLLRTAMILRANPSCISNLEKRIGMQLDQAALEDLLMPNFSYSMETLYNVDCVQRILDHFLAIDQVTGGASPCSIDDGQLIGSPSLTPITMVAKLIDGYLAEVAPDVNLKLPKFQALAAAVPEYARPLDDGLYRAIDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRIIVQVLFFEQLQLRTSIAGCFLVSDNLDGSRNLRSGFVGSNEGGWASAVKENQMCSAQEESVSKQNNGNNKVEKLKDRHVKHNRNSSISDKGSVSSIIHS 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01402 590 CDD BTB_POZ_NPY3-like 19 122 - -
Car01g01402 590 Pfam BTB/POZ domain 27 113 IPR000210 GO:0005515
Car01g01402 590 ProSiteProfiles BTB domain profile. 28 97 IPR000210 GO:0005515
Car01g01402 590 Coils Coil 588 590 - -
Car01g01402 590 MobiDBLite consensus disorder prediction 560 576 - -
Car01g01402 590 PANTHER OS12G0117600 PROTEIN 1 543 IPR043454 -
Car01g01402 590 SUPERFAMILY POZ domain 16 114 IPR011333 -
Car01g01402 590 ProSiteProfiles NPH3 domain profile. 213 502 IPR027356 -
Car01g01402 590 MobiDBLite consensus disorder prediction 549 590 - -
Car01g01402 590 Gene3D Potassium Channel Kv1.1; Chain A 10 131 IPR011333 -
Car01g01402 590 PANTHER - 1 543 - -
Car01g01402 590 Pfam NPH3 family 213 478 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01402 Car-Chr1 21628390 21632786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01402 8 544 EF-hand Containing Proteins AT3G44820 48.833 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01402 - - gmx:100794676 1035.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01402 01 21628390 21632786 Car01g01402 01 21628390 21632786 ECH