Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01399 atggaggaagaagaaaacgagaagagagcagtgagaaTATTCGTTGGAGGATTAAGTGAAGCCGTAACCGCCGAAGACATTCGCAGGTTATTCGAATCATTAGGTACCATTCAATCACTCGAAACCATCCGAACCAAAGGTCGCAGTCTCGCTTACCTTGATTTCCTCTCCGATCCTAAATCCCTTTCCAAACTTTTCAGCAAGTATAATGGGTGTGTGTGGAAAGGTGGAAAGCTAAGACTTGAAAAGGCTAAAGAGCATTATCTTGATCGCTTGAAAAAAGAATGGGAACAAGATGCGATGCTTAGTACCGAACCACCAGCTGCTGATCTTTCTACTCATAAGGAGGATTTGGTGAAGGAAATGCCCAAATCGAGACGCGCTGCAGATTTAAATGAAAAGCCTCTCAATATTTTCTTCCCAAGATTAAGATCGGTGAAATCCATACCATTTAGTGGAACTGGCAAGCATAAATACAGTTTCCAGAATATTAAAGTTCCTCCTATGCCTGTGCATTTTTGCGATTGTGAGGAACATTGTAGTCCTTTTGTCCCAACAAGAGAAAAGTCATCTATGAACAGGGAAGCAGAAATTGGTGGAATAAATGATGAAGAAATTAACATAATGAATGCTGTGATGAACAAGCTTCTTGAAAAAGAAAAGGTTCCTGCCACCAAGCATCTTGTAAAGAAGCAAGATGCATTTGAATCTCGCGATGCTTTACATTCTAATGCATTGGAAGCAGATAGTGAAACAGATGACGACGACGATGGTATCATAATCAACATTGCAACGAAGAAAAATAAAGCAGCTTTAATAGGGAGCGAAGAACTTGAAAGGGTCATGGAAAATCAGGAATCACGGTCCAATAAAATCAATATTGATGAGGAAGAACCCAACAAGAGTATGCTTCAAGTGCAGAAAGGGAGTAATAGCAATCCTAACAAGGTAAAGAAGAAAAAACCACTTCCCAAATCAGAAAGCAAAAGCAATGAAGGTGTGTCTAGTACCCCTGTTGGCAAGAGTAAAATGCAGACTCTTCTAGATGATCTGGGGTCTGGTAAACAGTCTACTGAACCAGAATATGATTTTGGTGTACCTGCTAAAGTTTCATGGTCTCAGAAGTCTTCATGGAGAGAACTTGTTGGTAAAGGAGGCAATGCTGCTTTCAGCGCCTCTCTTATATTGCCAAAGTTCGATTCTGGTAAAGATCAACAAAATTCTGATGGTTCTTCAACACCCTCCTGTACGGATGATGAAACTGAAAACGTGGAAATGCCGCTTGGTAAAGGAGGCAATGCTGCTTTCAGTGCCTCTCTCATAGGGCCAAAGTTCGATTCTGATAAAGATCAACAAAATTCTGATGGTTCTTTAACACCCTCATCTACAGACGATGAAACTGAAAACATGGACAGCGATGAATACCTAGAGAGCAAACCCACCAATGCACAAGTGATAGAAGAGCCTTCTGAATCTTTAACACCCTCATCTACAGATGATGAAACTGAAAACATGGAAAGTGATGAATACCTAGAGAGCAAACCCACCAATAATACACAAGTGATAGAAGAGCCTTCTGAAGCTCAACCTACGAATGCACAAGCGATGGAAGAACCTGCCGAAGCTCCACCTATCAATAAACAAGCAATAACTGAACCTGTTGAAACTCAGCATAACACTGCACCAAAAGAGACCGGCAGAGGCTCTGCATGGCTGCAAAAGCAATCCTGGACCCAACTGGTTAATGAGAAAAACAACTCATTTAGCATTTCACAAATTTTGCCTGGCATTACTTTCGCAGAACAAACGGCCAAGGAACCCATTTTGCACCCTGCTGATTCCAATGATTGCAAGCATAATGGTGCTGATAATAAAACTGTTAACAGAACTATCATTGATGGCTTCAACTTAAGGAATATTGTACCAGAGAATAGTGAGCATGTTGGTGCCGATGGTATAGTTTCTGCTCCAGTAGTTGAGAAAACAATTGAAACATGTCCAAGGGAAGGATCCAGTACAAAGGTTGAAATAGGAGAAACATGCTCGTTTATGAGAAGTGCTGCTTCTTTGAAAGATTGGGCAAAAGCTAAAGCTGCTGTTAGTGGATCACTGAAAAGAAAACGTGGTGAGAAGTAA 2136 0.4026 MEEEENEKRAVRIFVGGLSEAVTAEDIRRLFESLGTIQSLETIRTKGRSLAYLDFLSDPKSLSKLFSKYNGCVWKGGKLRLEKAKEHYLDRLKKEWEQDAMLSTEPPAADLSTHKEDLVKEMPKSRRAADLNEKPLNIFFPRLRSVKSIPFSGTGKHKYSFQNIKVPPMPVHFCDCEEHCSPFVPTREKSSMNREAEIGGINDEEINIMNAVMNKLLEKEKVPATKHLVKKQDAFESRDALHSNALEADSETDDDDDGIIINIATKKNKAALIGSEELERVMENQESRSNKINIDEEEPNKSMLQVQKGSNSNPNKVKKKKPLPKSESKSNEGVSSTPVGKSKMQTLLDDLGSGKQSTEPEYDFGVPAKVSWSQKSSWRELVGKGGNAAFSASLILPKFDSGKDQQNSDGSSTPSCTDDETENVEMPLGKGGNAAFSASLIGPKFDSDKDQQNSDGSLTPSSTDDETENMDSDEYLESKPTNAQVIEEPSESLTPSSTDDETENMESDEYLESKPTNNTQVIEEPSEAQPTNAQAMEEPAEAPPINKQAITEPVETQHNTAPKETGRGSAWLQKQSWTQLVNEKNNSFSISQILPGITFAEQTAKEPILHPADSNDCKHNGADNKTVNRTIIDGFNLRNIVPENSEHVGADGIVSAPVVEKTIETCPREGSSTKVEIGETCSFMRSAASLKDWAKAKAAVSGSLKRKRGEK 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01399 711 MobiDBLite consensus disorder prediction 328 353 - -
Car01g01399 711 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 11 86 IPR000504 GO:0003723
Car01g01399 711 PANTHER TRANSCRIPTIONAL REGULATOR 1 710 - -
Car01g01399 711 Coils Coil 275 295 - -
Car01g01399 711 MobiDBLite consensus disorder prediction 280 366 - -
Car01g01399 711 MobiDBLite consensus disorder prediction 280 302 - -
Car01g01399 711 MobiDBLite consensus disorder prediction 399 542 - -
Car01g01399 711 MobiDBLite consensus disorder prediction 511 533 - -
Car01g01399 711 MobiDBLite consensus disorder prediction 400 420 - -
Car01g01399 711 SMART rrm1_1 12 82 IPR000504 GO:0003723
Car01g01399 711 Gene3D - 1 89 IPR012677 -
Car01g01399 711 CDD RRM_NOL8 12 85 IPR034138 -
Car01g01399 711 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13 56 IPR000504 GO:0003723
Car01g01399 711 SUPERFAMILY RNA-binding domain, RBD 6 97 IPR035979 GO:0003676
Car01g01399 711 MobiDBLite consensus disorder prediction 476 500 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01399 - - cam:101506793 973