Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01360 ATGGCGTCCTCTGATCCCAACAAATTGTTAACCAAAGCTGATAAACTAACAAGACTTAGTCTCACCAGATGGAGTGCTGATTGGAAGAGTGCTACTGTTCTATATGAACAGGCTGCTAATGGGTTTAGAGTTGCCAAGAACACTGAGAAAGCCAAAACAGCATTTGAGAAAGCTTCGAAAGGACAAGAGATGCTTTCTTCACCTTGGGATGCAGCTAAGCACATGGAATCTGCTGCTGCTCTGGCCAAGGAACTGAGTAACTGGAAAGAAGTAGCAGACTTCTATCAAAAGGCATCTGAACTCTACTTGGAGTGTGGGAGACCACAACCTGCATCGGATGCTCTTGCAAAGGGAGCCCGTTCTCTGGAAGATACCATGCCTGAGGAAGCTATTCAGCTATATACAGATGCTTGTACAGTTCTTGAAGACGATGGAAAGGAACAGATGGCCTTTGATCTATATCGTGCTGTAACTAGTGTTTATATAAAACTTGAGAAATATACAGATGCTGCATCTTCCCTGTTGAGATTGGGCTTGGCAGCTGACAAGTGTAATGCTACCAATAGTCAGAGCAAGGCTTATCTTAGTGCAATTATTGTCTACCTTTATGCTCACGACTTTAAGCAAGCAGAGAAGTGCTATAATGACTGCTCTCAGATTGATGCTTTTCTCAAAAGTGACCATAATCGTTGCGCTAGCAAGTTACTTGCTGCTTACACAGATGGAGATGTTGACGAAATCAAAAAAGTTGCTCAGTCAAGCACCGTTTCCCATCTTGACCATGCAATCATTAGGCTTGCGAGGAAACTTCCGACAGGGGATGTGAGTGCATTAAAGGTTGTCACTCGTGAAGACGACGAGGACTCACTGGACGAAAATGACCTGACTTAA 891 0.4377 MASSDPNKLLTKADKLTRLSLTRWSADWKSATVLYEQAANGFRVAKNTEKAKTAFEKASKGQEMLSSPWDAAKHMESAAALAKELSNWKEVADFYQKASELYLECGRPQPASDALAKGARSLEDTMPEEAIQLYTDACTVLEDDGKEQMAFDLYRAVTSVYIKLEKYTDAASSLLRLGLAADKCNATNSQSKAYLSAIIVYLYAHDFKQAEKCYNDCSQIDAFLKSDHNRCASKLLAAYTDGDVDEIKKVAQSSTVSHLDHAIIRLARKLPTGDVSALKVVTREDDEDSLDENDLT 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01360 296 Gene3D Tetratricopeptide repeat domain 3 272 IPR011990 GO:0005515
Car01g01360 296 PANTHER GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN 2 288 - -
Car01g01360 296 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 2 288 IPR000744 GO:0006886
Car01g01360 296 Pfam Soluble NSF attachment protein, SNAP 5 261 - -
Car01g01360 296 SUPERFAMILY TPR-like 7 250 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01360 Car-Chr1 19674376 19679967 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01360 K21198 - gmx:100790986 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01360 01 19674376 19679967 Car01g01360 01 19674376 19679967 ECH