Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01325 ATGTTAGCTTCTTCGCTCTCATTCCTTCATTCTTGTGCATTCCCCTCTTCTTCTTTAACAATTCCAACGCCAAATCCCAATTCCAATTCATCTTTATCTTTTGTCGTTGAAGCCAAATCCACTACCCGAAGAGAAGACCGAACTGCCCGCCATGTCCGTATCAGGAAGAAGGTTGAAGGAACGCCCGAAAGACCAATGATTGATGACACCAAGATGCACACACTTGCATCAGCTTCAACAATGCAGAAGACAATTGCTGAAGAGTTGAACTATACCTCTGGCCCTACAATTGAAGTAGCAAAGAAGGTGGGTGAGATCATTGCAAAATCTTGTCTAGAGAAAGGGATCACAAAGGTAGCCTTTGACCGAGGTGGTTACCCATACCATGGCCGTGTTAAAGCAATTGCTGATGCGGCTCGCGAAAATGGCCTGGACTTCTAA 441 0.4512 MLASSLSFLHSCAFPSSSLTIPTPNPNSNSSLSFVVEAKSTTRREDRTARHVRIRKKVEGTPERPMIDDTKMHTLASASTMQKTIAEELNYTSGPTIEVAKKVGEIIAKSCLEKGITKVAFDRGGYPYHGRVKAIADAARENGLDF 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01325 146 SUPERFAMILY Translational machinery components 43 144 - -
Car01g01325 146 CDD Ribosomal_L18_L5e 54 144 - -
Car01g01325 146 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 42 146 IPR005484 GO:0003735|GO:0005840|GO:0006412
Car01g01325 146 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 22 146 - -
Car01g01325 146 TIGRFAM L18_bact: ribosomal protein uL18 66 146 IPR004389 GO:0003735|GO:0005840|GO:0006412
Car01g01325 146 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 22 146 IPR005484 GO:0003735|GO:0005840|GO:0006412
Car01g01325 146 Gene3D - 63 146 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01325 K02881 - gmx:100306308 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01325 01 18386103 18388350 Car01g01325 01 18386103 18388350 ECH