Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01309 ATGAAGCCTTCTTTGGCCCCCAGCAAAGTCATGGATGTCTTCACAAAGGCTGCTGAATACATGGAAATTCCAGTTCGAAGAACAGATGATGAACCTCTTCAGAAGCTTTTTATGTTGGTAAGGAGTGAGTTGAATCTTGACCTCAAGAACATTAAGCAGGAGCAGGCCAAATTTTGGAAGCAGCATCCTGCATTAGTTAAGACGGAACTGTTAGTTCAAGCTCAGTTGACACGTGAATTTTCAGCCTTGTCTCCATCTTTACAAAGTGATTTCAGACGGATTTTGGAAACAGCACCTCGCCTGCTTGAAGAATTAATGAAGATGGCAGTCATTCCACGCAATGCTCAGGGGCACGGATGGTTGAGACCTGCAATTGGTGTTGTTGAGCTTTCCCAATGTATCATCCAGGCTGTTCCTCTCAGTTCTAGAAAGACTACCAGTGGATCACCTGAAGGCATTGCACCATTTCTGCAGCTGCCACACATTAGTGAGACTGTGGTTAAGAAGGTGGCCCGTAAGAAGGTAAGAACATTTCAGGAACTTTATGACATGGACTCACAGGAGCGAGCTGAGCTGCTTACTCAAACAGCAGGGTTATCTTCTGATGAAGTGCAAGACGTTGAGATCGTTCTGGGTATGATGCCTTCCTTGACCCTTGAGGTAACTTGTGAGACTGAAGGCGAAGAGGGTATACAAGAAGGTGACATTGTTACCATCCATGCTTGGATTAATAATAAAAGAGGTAATGGCCTGATTGGTGCCCTTCCGCATGCCCCTCACTATCCATTTCACAAGGAAGAGAATTTCTGGTTTTTGCTTGCGGATTCTGTTTCGAACAATGTATGGTATTTTCAGAAGGTTAGTTTCATGGATGAAGCTGCTGCTGTAACCGCTGCCTCTAAGACAATTGCGGAATCTAAGGAGGGATCTGGGGCAACTGCGAAGGAGACCAGTAAGGCAGTTGCAGAAGCAGTGGAGAAGGTGAAGGGGGGATCTAGATTGGTAATGGGCAAGTTCCAGGCACCATCAGAGGGTAACTATAATTTGACTTGCTATTGTTTGTGTGACTCTTGGTTGGGCTGTGACAGGAAGACAAATTTAAAGCTCAAAGTTTTGAAACGGACTCGGGCTGGCACTAGGGCTGCTGCTTTAGCTGATGAGGGACCTATCATggaggatggagttgaggaggatgaggagaatgaggaagaagagtacgatgatgactatgagagtgagtatagtgaagatgaagaagatgatcaaaatTCAAAAAATAAGCATCAAGCTGCTAATGGAACCGGGAATAAAAACAGTCAAGCTGCTGAAAGTTCAGGCTCAGATGAAGAATGA 1353 0.4198 MKPSLAPSKVMDVFTKAAEYMEIPVRRTDDEPLQKLFMLVRSELNLDLKNIKQEQAKFWKQHPALVKTELLVQAQLTREFSALSPSLQSDFRRILETAPRLLEELMKMAVIPRNAQGHGWLRPAIGVVELSQCIIQAVPLSSRKTTSGSPEGIAPFLQLPHISETVVKKVARKKVRTFQELYDMDSQERAELLTQTAGLSSDEVQDVEIVLGMMPSLTLEVTCETEGEEGIQEGDIVTIHAWINNKRGNGLIGALPHAPHYPFHKEENFWFLLADSVSNNVWYFQKVSFMDEAAAVTAASKTIAESKEGSGATAKETSKAVAEAVEKVKGGSRLVMGKFQAPSEGNYNLTCYCLCDSWLGCDRKTNLKLKVLKRTRAGTRAAALADEGPIMEDGVEEDEENEEEEYDDDYESEYSEDEEDDQNSKNKHQAANGTGNKNSQAAESSGSDEE 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01309 450 Gene3D - 1 138 - -
Car01g01309 450 PANTHER DNAJ PROTEIN ERDJ2-LIKE 1 442 - -
Car01g01309 450 Pfam Sec63 Brl domain 2 367 IPR004179 -
Car01g01309 450 SMART Sec63_2 3 369 IPR004179 -
Car01g01309 450 Gene3D - 154 212 - -
Car01g01309 450 SUPERFAMILY Sec63 N-terminal domain-like 8 215 - -
Car01g01309 450 MobiDBLite consensus disorder prediction 427 443 - -
Car01g01309 450 MobiDBLite consensus disorder prediction 390 419 - -
Car01g01309 450 MobiDBLite consensus disorder prediction 378 450 - -
Car01g01309 450 Gene3D C2 domain 218 378 IPR035892 -
Car01g01309 450 SUPERFAMILY E set domains 219 373 IPR014756 -
Car01g01309 450 PANTHER SEC63 DOMAIN-CONTAINING 1 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01309 Car-Chr1 18061050 18065815 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01309 K09540 - gmx:100809969 750.355