Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01300 ATGGGTAGTGATCGTCTTACCCGCTCTCACTCTATCCGTCAGAGGTTTGATGAAATTCTCACTGGTCACAGGAATGAAATTTTGGCCCTTCTATCAAGGATTGAAGCAAAGGGAAAGGGAATCCTGCAACACCATCAAGTCATTGCCGAGTTTGAAGAAATTCCTGAGGAGAATAGGCAAAAACTAGTTAATGGAGCCTTTGGAGAAGTTTTGAGATCTACCCAGGAAGCCATAGTGTTGCCACCATTTGTTGCTCTTGCTGTTCGTCCAAGGCCTGGTGTTTGGGAGTATCTGAGAGTCGATGTACACGGCCTTGTTGTTGATGAGCTGAGCGCTGCTGAGTATCTCAAGTTCAAGGAGGAACTTGTTGAAGGAAGTTCTAACGGCAACTTTGTGCTTGAGTTGGACTTTGAACCATTCAACGCCTCTTTTCCGCGACCAACCTTGAACAAGTCGATTGGAAATGGTGTGGAGTTCCTTAATCGCCATCTTTCTGCTAAGCTTTTCCATGGCAAAGAGAGCTTGCAGCCACTGCTGGAATTCCTCAGGCTTCACAACTATAATGGAAAGACTATGATGGTGAATGACAGAATTCAAAATCTGAATTCTCTTCAACATGTTTTGATAAAAGCAGAAGAGTATCTGAGCACAATTGCTCCGGAAACATCCTACTCGGAATTTGAACACAAGTTCCAGGAGATTGGTTTGGAGAGAGGGTGGGGAGACACCGCTGAGCGCGTCCTTGAAATGATCCAGCTTCTATTGGATCTTCTTGAGGCACCCGATCCTTGCACCCTTGAGACATTCCTTGGAAGAATCCCTATGGTCTTTAATGTTGTCATCCTTTCTCCACATGGTTACTTTGCCCAAGATAATGTTTTAGGATACCCTGATACTGGTGGACAGGTTGTTTACATCTTGGACCAAGTTCGCGCCTTGGAGAATGAGATGCTCAAGCGTATAAAGCAACAAGGCTTGGATATCACCCCTCGCATTCTCATCATCACTCGTCTTCTCCCTGATGCAGTGGGAACTACCTGCGGCCAACGTCTTGAGAAAGTTTATGATACCGAACATTGCCACATTCTTCGAGTTCCCTTTAGAACAGAGAAGGGAATTGTTCGCAAATGGATCTCGAGATTTGAAGTCTGGCCTTACCTAGAGACTTTCACCGAGGATGTTGCCAATGAACTTGCTAAAGAGTTGCAAGGAAAGCCTGATCTTATCGTCGGAAACTACAGTGATGGAAACATTGTTGCATCTTTGTTAGCACATAAATTAGGTGTAACTCAGTGTACTATTGCTCATGCACTTGAGAAGACCAAGTATCCAGAATCTGACATTTACTGGAAAAAGTTTGATGACAAATATCACTTCTCATGCCAATTTACTGCTGATCTTTTTGCAATGAACCACACAGATTTTATTATCACTAGTACCTTCCAAGAGATCGCTGGAAGCAAGGATACTGTTGGACAATATGAGAGTCACACTGCCTTCACCCTTCCAGGACTTTACCGAGTGGTTCACGGTATCGATGTTTTCGATCCAAAGTTTAACATTGTCTCTCCCGGAGCTGATATGAGCATTTACTTCCCTTATACTGAAACCGAGCGTAGGTTGACATCATTCCACCCTGAGATTGAAGAACTTCTTTATAGCTCAGTGGAGAATGAGGAACACATATGTGTATTGAAGGACCGCAGCAAGCCAATTATCTTCACCATGGCAAGGTTGGACCGAGTGAAGAACATTACAGGACTTGTAGAATGGTACGGTAAGAACGCTCGCCTAAGGGAGTTAGTAAACCTTGTTGTTGTTGCCGGAGACAGGAGGAAGGAGTCCAAAGATCTAGAAGAAAAAGCTGAGATGAAGAAAATGTATGGCCTAATCGAGACCTACAAACTAAACGGCCAATTCAGATGGATTTCCTCACAGATGAACCGAATTCGGAACGGAGAGCTCTACCGTGTCATTTGTGACACAAAGGGTGCTTTTGTGCAGCCTGCAATTTATGAAGCTTTTGGTTTGACTGTTGTTGAGGCTATGACTTGTGGATTGCCCACATTTGCTACTTGTAATGGTGGTCCTGCTGAGATAATTGTGCATGGAAAATCTGGTTACCATATTGATCCTTACCATGGCGACCTTGCCGCTGAGACTCTCGTTGAGTTCTTTGAGAAGAGCAAGGCTGATCCATCTTATTGGGACAAAATCTCTCATGGAGGTCTCAAACGTATTCATGAGAAGTACACATGGCAGATTTACTCTGACAGGCTTCTGACTCTGACTGGTGTGTATGGGTTTTGGAAGCATGTGACAAACCTTGATCGCCGTGAGAGCAAACGCTACCTTGAGATGTTCTATGCACTCAAGTACAACAAATTGGCTGAAGCTGTGCCTCTTGCTGTTGAAGAGTAA 2421 0.4424 MGSDRLTRSHSIRQRFDEILTGHRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQKLVNGAFGEVLRSTQEAIVLPPFVALAVRPRPGVWEYLRVDVHGLVVDELSAAEYLKFKEELVEGSSNGNFVLELDFEPFNASFPRPTLNKSIGNGVEFLNRHLSAKLFHGKESLQPLLEFLRLHNYNGKTMMVNDRIQNLNSLQHVLIKAEEYLSTIAPETSYSEFEHKFQEIGLERGWGDTAERVLEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLKRIKQQGLDITPRILIITRLLPDAVGTTCGQRLEKVYDTEHCHILRVPFRTEKGIVRKWISRFEVWPYLETFTEDVANELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFDDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTETERRLTSFHPEIEELLYSSVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRIRNGELYRVICDTKGAFVQPAIYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGYHIDPYHGDLAAETLVEFFEKSKADPSYWDKISHGGLKRIHEKYTWQIYSDRLLTLTGVYGFWKHVTNLDRRESKRYLEMFYALKYNKLAEAVPLAVEE 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01300 806 PANTHER SUCROSE SYNTHASE 1 805 - -
Car01g01300 806 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 295 763 - -
Car01g01300 806 Gene3D Glycogen Phosphorylase B; 527 753 - -
Car01g01300 806 TIGRFAM sucr_synth: sucrose synthase 24 802 IPR012820 GO:0005985|GO:0016157
Car01g01300 806 Pfam Glycosyl transferases group 1 564 729 IPR001296 GO:0016757
Car01g01300 806 PANTHER - 1 805 IPR012820 GO:0005985|GO:0016157
Car01g01300 806 Gene3D - 146 275 - -
Car01g01300 806 Gene3D - 25 145 - -
Car01g01300 806 Pfam Sucrose synthase 8 553 IPR000368 GO:0005985|GO:0016157
Car01g01300 806 Gene3D Glycogen Phosphorylase B; 280 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01300 Car-Chr1 17955136 17961917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01300 6 806 Glycosyltransferase AT3G43190 84.769 0.0 1431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01300 K00695 - gmx:100819730 1503.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01300 01 17955136 17961917 Car01g01300 01 17955136 17961917 ECH
Car07g00402 07 3544033 3549407 Car01g01300 01 17955136 17961917 PCT