Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01267 ATGGCAGAAGAATTTTCAAAAGCAGTAGAAGAAGGTATAAGATTATCAAAACGAATATACTTCGGTAACGATAGAGCAGTATCACCACCGAAACCACCAACATCAATGCTTAAATCAAACACCGCATTTCTTCCAACATCTCCCATGGTTTATGCGGTTATTCACGATCCTGCCATTGTTGATAATCCAGATGTACCTAGCTATCAACCTTACGTGCATGGGAGGTGTGAACCTCCTGCTCTTATTCCGCTTCATATGATTAATGTTGTTGAGCTTAAGGGGGATTGTTATTTAAATAGTGCGTTTCTTGAAGTTGTTGGATGTTGGAGGCTTCATTGTGTTTCTGGGAGTCGTGCTTGTGATTGTATTCTTGCTGTTCCTATGGGTCCTCAGGGTTCAATTCTAGGTGTGGAGGTTAGTGTTCATAGGAAATCATATTCTACTCAACTGGTTGATATGGAAGACAAAACTGGTAAAGATAATGTGACCAGAACTCAAGATGGAGGCTTTCTCAAGTCCAATTTGTTCACTTTGACTATACCACAGATAGATGGAGGTTCAAATTTATCGGTTAAAATTAGATGGTCTCAGAAGATAACATGCTGCAATGATGTGTTCTCGTTGAATGTGCCATTTAACTTTCCGGATTATGTGAACCCTGCCGGGAAGAGGATGTCTAAAAAGGAAAAAGTACAATTAAACGTGAATGCTGTTACCGGTAGTGAGATAATGTGCAAAACAACAAGTCATCCTATGAAGGAAATAATGCGCAACGCTGGGAGCATAGGTTTCTCACATGAAACTGATGTTCTCTCCTGGTCAAAATTTGATTTTAGCTTTTCATATGCTGTCTCTTCAAGTCAAATAAATGGGGGGGTTCTTTTGGATTCTGCATCTTTGGATGATGATGATCAGAGAGAGCTGTTTTGCATGTACCTTTCTCCTGGAAATATTCAGAGTAAGAAGGTATTCAGAAAAGACATTGTATTCGTTATCGACATAAGTGGAAGTATGCGAGGAAAGCTAATTGATGACACAAAGAATGCATTACAATCTGCTCTCTCTAAGCTTCATCATGATGATTCATTTAGTATTATAGCATTTAATGGAGAGACATATCAATTTTCAACTTCAATGGAATTGGCTTCAAAGGATGCTGTTGAAAGGGCCATTCAATGGATCAACATAAACTTTGTTGCTGGGGGTGATACAAATATTTTGCATCCATTAAACATGGCAATAGAGATGCTTTCCGATGCCCAAAGATCAGTTCCAATTATTTTTCTAGTTACTGATGGAACTGTTGAAGATGAGAGACAAATTTGTGATATGATAAAGAATCATACAATCGGAGGAGAATCAATGTGCCCCCGAATTTACACTCTGGGCATAGGTTCATTCTGCAATCATTATTTCTTGCGGATGCTTGCCATGATTAGTAAGGGCCAACATATTGCAGCATTGGATCCTCAAATGCTAAAACTATTTGATAAAGCTTCATCTATTGTTCTTGCAAATATCACGATGAACTTCGATGATCTGGATGAAGTTGAGGTGTACCCGTCGCATATTCCGGATCTTTCATCAGATAGTCCATTGACTTTATTCGGAAGATACAGGGGAAGCTTTCCAGATGTTCTTAAAGTAAAAGGTGTCTTGGCTGATTTCAGTAACTTTGTAATAAATTTGAATATACAAAATGCTAAGGACATGCCTATAGAAAGGGTTTTTGCAAGAGAACAAATAGAGTATCTTACTGCTCAAGCATGGCTTTCTAAAGATAAACAACTAGAACAGAAGGTTGCAAAAATAAGCTTACAAACCGGCTTTTTGTCCGAGTATACACACATGGCAATTCTTGAGAATGATCATCTAAAGAAAGCCAAGCAATCAGATGGAACAAAAGTATCAAAAGGGAAAGGTGGTAATGTCCAAGGCCAGAGAATGATTTTGCTCCCAAAATTAGGTATAGGCTTTGGCAACTTGACTGCAACATCCGAGAACATTCCACCAGGAGTTGAAGATACAAGTTTGTCTGATGGTGCTGAAATCTTTGTTAAGAAAGCCGTAGATTGTTGTGGAAGCTTCTGCAATCATTGCTGTTGTTGCATGTGCTGCATCCAAGCCTGTACCAAGATAAACAACCAATGTGCAATTGCATTTACTCAGCTTTGTGTTGGTTTAGGATGCTACAGCTGCCTCAGCTGTTGTTCTGATATATGTTGTTCTGGAAATGAAAGTTGA 2244 0.3868 MAEEFSKAVEEGIRLSKRIYFGNDRAVSPPKPPTSMLKSNTAFLPTSPMVYAVIHDPAIVDNPDVPSYQPYVHGRCEPPALIPLHMINVVELKGDCYLNSAFLEVVGCWRLHCVSGSRACDCILAVPMGPQGSILGVEVSVHRKSYSTQLVDMEDKTGKDNVTRTQDGGFLKSNLFTLTIPQIDGGSNLSVKIRWSQKITCCNDVFSLNVPFNFPDYVNPAGKRMSKKEKVQLNVNAVTGSEIMCKTTSHPMKEIMRNAGSIGFSHETDVLSWSKFDFSFSYAVSSSQINGGVLLDSASLDDDDQRELFCMYLSPGNIQSKKVFRKDIVFVIDISGSMRGKLIDDTKNALQSALSKLHHDDSFSIIAFNGETYQFSTSMELASKDAVERAIQWININFVAGGDTNILHPLNMAIEMLSDAQRSVPIIFLVTDGTVEDERQICDMIKNHTIGGESMCPRIYTLGIGSFCNHYFLRMLAMISKGQHIAALDPQMLKLFDKASSIVLANITMNFDDLDEVEVYPSHIPDLSSDSPLTLFGRYRGSFPDVLKVKGVLADFSNFVINLNIQNAKDMPIERVFAREQIEYLTAQAWLSKDKQLEQKVAKISLQTGFLSEYTHMAILENDHLKKAKQSDGTKVSKGKGGNVQGQRMILLPKLGIGFGNLTATSENIPPGVEDTSLSDGAEIFVKKAVDCCGSFCNHCCCCMCCIQACTKINNQCAIAFTQLCVGLGCYSCLSCCSDICCSGNES 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01267 747 Pfam von Willebrand factor type A domain 326 483 IPR002035 -
Car01g01267 747 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 746 - -
Car01g01267 747 Gene3D von Willebrand factor, type A domain 326 500 IPR036465 -
Car01g01267 747 ProSiteProfiles VWFA domain profile. 327 514 IPR002035 -
Car01g01267 747 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 746 - -
Car01g01267 747 SUPERFAMILY vWA-like 326 488 IPR036465 -
Car01g01267 747 SMART VWA_4 325 500 IPR002035 -
Car01g01267 747 CDD vWA_interalpha_trypsin_inhibitor 324 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01267 Car-Chr1 16747044 16752517 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01267 - - gmx:100820133 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01267 01 16747044 16752517 Car01g01267 01 16747044 16752517 ECH
Car07g00380 07 3356307 3362345 Car01g01267 01 16747044 16752517 PCT