Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01260 ATGTCACTAATCTCAACCTTGTTTCTAGCTGCTTTAGGTGCTCTCACATTTCAAATCTTCTATTTCTCACCTATAGATCCAGTTTTGCTTGAAATACCACCTTCATTATTTTCCACTCTTTCAACCAAAAACAACCAATTACAGAATGTGATTAAACTTGGAGAAGGATTTTTGAAGCAACCAGAAGATGTTTGTGTGGATAAAGAAGGGACCATCTATACATCAACAAGAGATGGTTGGATTAAAAGATTGCCAAGGAATGGAAATTGGGAGAATTGGAAGTATATACATAATTCTACTTTGATTGGAATCACAACAGCAAAAGATGGTGGTCTCATTGTGTGTGATGGTACTAAGGGTTTGCTCAAGGTTACAGAAGATGGTTTCAGTGTTATCCTTTCACTAGAGAATGATTCTCAATTAAGGTTTGCGGATGATGTAATAGAAGCAGTGGATGGAAACATATATTTCAGTGTTCCAAGTACAAAATTTGGTTTACACAGTATGCATCTAGATGTGCTTGAGGCAAGACCTCATGGACAACTTTTAAAGTACAATCCTACTTCAAATGAGACCGTTATTGTCGTTCATGATTTGGCCTTAGCCAATGGCGTTGCACTATCCAAGGACCAAGATTTTATTGTGGTTTGCGAAACTTGGAAATTTAGGTGTATGAGACATTGGCTAAAAGGAATTAATAAAGGCAAAACAGATACCTTCATTGAAAACCTTCCTGGTGGACCTGATAACATTAATCTTGCTCCTGATGGCTCATTCTGGATCGCTTTGGTTCAGTTAACTTCTGAAAAGACAAGGTTTGTGCACACCTCTATGGTAATCAAGCACTTGTTAGCTTCATTTCCAAAGCTAATTAGCCTGATTAATACTTCAAATAAGTCAGCAATGGTGGTGAAAGTAACAAATGAAGGCAAGATTATCAAAAAAATTGGTGATAGTGAAGGGAAGGTGATGAATTTTGTAACTTCAGCTGTGGAATTTGAGGACCATCTTTACCTAGGTAGTCTTACATCTAACTTTGTTGGAAAATTTCCACTCCAAATGCGTAGAAAAAGTGAAAATATCTTATGA 1089 0.3673 MSLISTLFLAALGALTFQIFYFSPIDPVLLEIPPSLFSTLSTKNNQLQNVIKLGEGFLKQPEDVCVDKEGTIYTSTRDGWIKRLPRNGNWENWKYIHNSTLIGITTAKDGGLIVCDGTKGLLKVTEDGFSVILSLENDSQLRFADDVIEAVDGNIYFSVPSTKFGLHSMHLDVLEARPHGQLLKYNPTSNETVIVVHDLALANGVALSKDQDFIVVCETWKFRCMRHWLKGINKGKTDTFIENLPGGPDNINLAPDGSFWIALVQLTSEKTRFVHTSMVIKHLLASFPKLISLINTSNKSAMVVKVTNEGKIIKKIGDSEGKVMNFVTSAVEFEDHLYLGSLTSNFVGKFPLQMRRKSENIL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01260 362 Pfam Strictosidine synthase-like, N-terminal 43 84 - -
Car01g01260 362 Pfam Strictosidine synthase 150 231 IPR018119 GO:0009058|GO:0016844
Car01g01260 362 Gene3D - 42 361 IPR011042 -
Car01g01260 362 PANTHER STRICTOSIDINE SYNTHASE-RELATED 7 353 - -
Car01g01260 362 PANTHER ABC TRANSPORTER PERMEASE PROTEIN-LIKE PROTEIN 7 353 - -
Car01g01260 362 SUPERFAMILY Calcium-dependent phosphotriesterase 36 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01260 Car-Chr1 15798024 15804172 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01260 - - mtr:MTR_2g042430 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01260 01 15798024 15804172 Car01g01260 01 15798024 15804172 ECH