Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01250 ATGGTTTCCATGGCGACCACCAATAGAATCCAAACCTACCAAGACTTCGCTAAAGTTCACGGAATTTTGCTCGCCGCATCAGGGTTACCGGAGTCACTTCACCGCCGTCTCTTCCAGAAGCTCTTCACCGAAACTTTCGACGGCGGCGAACACTTCCAAATCGAACCTTGCGAAGATGGACGCACGAGACGCCTCGTTTTCACTTCGGATTCTATGGCTAAGGACTCCAATGTCTTCCTCATTGATCACGCTTGGACTTTCAGACTCCCCGACGCTTACAAGCAGCTGCGGGAGGTTCCGGGATTGGCAGAGAGGATGGGTTCTttgatgtgtgtggatgtcgacatgaattcggatggtgaaactgatgttgatggcgttggtgatgAAGTTTCGAGAGACAAGCTTGGTGTAGTGGAAATGTTGGAAAGTGAGGTTCGAGAGGCAAAAGAGAAAGGTGACGGTACATTGAGATGGTTGGAGCTTGACGGTCTTGACATTGATGATGATATGCTTCTATCACTGGACTTATCTACTAGATTTCCGGATTTAGTGGCGCTTAGCCTATTTGGAAACAAGCTTACAAGTGCTGAACTGATTGTTCAGGAAGTTATCAAATTTAAAAATCTCAAAGGACTCTGGCTGAACAATAATCCGGTTCTTAAAAACCGTGATGGTGAGCTTGCAGGTATTATTCTTAAGGAGTTACCAGAACTGGAGATTTATAATTCAACTTTCACAAGCAATTTTGGGGAGTGGGCTTTGGGCTTTTGTGCAGGGATCTATGGAAAGGATAACCCAGCAAAGGCTGGTCAAGCTGACAGTCCAGTGTTGAGTGTATCTAGTCTCGACCTTTCAAATAGAAACATCCACAATTTGACCAACAAGGAATTTTCACCCATTTGTTTGCCGTCTCTTTCATACTTGAACATTCGTGGAAATCCATTGGGGCAAAACTCAGCTGCTGGCTTGTTAGATCTGCTGAGGAGATTCCCTTGCTTACGTTCATTGGAGGTGGATATCCCCGGTCCTCTTGGAGAAAGTGCCATTGAAATTCTGGAATCTCTTCCAAACATTTCTGAACTAAATGGTATCTGTGCATCCACAATATTGGAAACTGGAAAGCATGTTATCGATTCAGTTCTTCGTCCTCGTCTTCCTGAATGGACTCCTGATGAGCCTATTCATGACCGTATTATAAGTGCAATGTGGCAATATCTAATGACTTATAGACTTGCTGATGAAGAAAAGTTGGACGAAACCTCTGTATGGTATGCGATGGATGAATTAGGTTCTGCTTTGCGGCACAGTGATGAGCCAAATTTTAGAGTGGCCCCTTTTCTCTTCATGCCAGAGGGTAATCTGGCATCAGCTGTGAGCTTTTCTATTTTATGGCCAACAAAGAATGTTTGTAAAGGTGATGAATGCACTCGTGACTTTCTTCTTGGTATTGGGGAAGAAAAACAACGTTCTGCCAAACTTACTGCCTGGTTCCATACACCAGAGAACTATTTTATCCAGGAGTATGAGAAGTACAATCAGAAATTGCAAACCACAAGTTTGATACCACCCACCACTATGCAGTCTTCTGAGAGCAGAAGCATCCGTCCACATGATGGGCGTCCTTTACAGGTTTACACAGATATACCTCATGTGGTGGAGAACTTGACACATCCTGAGTTTGCAATCATAAAGGACCCAAAAGATGCAGATATAATATGGACAAGTGTGCAGGTAGATGAAGAGATGAAGAACGCCGCAGGATTAACAGATCAGCAATACATTAATCAATTTCCATTTGAAGCCTGTCTTGTCATGAAACATCATTTAGCAGAGACAATTCAGAAGGCACATGGATCTCCTCAATGGTTGCAGCCTACGTATAATCTTGAAACTCATCTGTCTCAACTTATTGGTGACTATTCTGCACGCAAAAGAGAAGGACTAGACAACCTTTGGATCTTAAAACCCTGGAACATGGCCCGTACTATTGATACTACCGTAACTGATAATTTACCAGCAATAATCCGACTCATGGAAACTGGTCCAAAAATATGCCAGAAGTATATTGAACAGCCTGCCTTGTTCCAGGGTAAAAAGTTTGATCTCCGTTATGTAGTACTGGTTCGGAGCATGCATCCTTTGGAGATATTCCTTTCCGATTGTTTCTGGGTCAGGATAGCTAACAACCAATATTCTTTGGACAGAAGTAGTTTATTTGAGTATGAAACTCACTTCACTGTTATGAATTATCGTGGAAGAATAAATCATAAAAATATCAAGGATTTTGTGAGGGAATTTGAGGAAGAACATCAAGTTAAATGGTTGGATATACATACAAGAGTAAGGAATATGATTCGATCAGTGTTTGAGGCAGCTGCGGTTGCACATCCTGAGATGCATAGTCCAACATCAAGGGCAATGTACGGTGTAGATGTCATGTTAGACAGCTCTTTCCAACCTAAGTTACTAGAGGTGACGTACTGTCCTGACTGTACGCGAGCTTGTAAGTATGACATGGATATCGTTGTTGGAGAAGGAGGTGTTGCGAAAGGTTCTGATTTCTTCAACAATGTGTTCAGGTGTCTCTTTTTGAATGAAATTTCTCAGGTTAGCCAATTGTAA 2625 0.4156 MVSMATTNRIQTYQDFAKVHGILLAASGLPESLHRRLFQKLFTETFDGGEHFQIEPCEDGRTRRLVFTSDSMAKDSNVFLIDHAWTFRLPDAYKQLREVPGLAERMGSLMCVDVDMNSDGETDVDGVGDEVSRDKLGVVEMLESEVREAKEKGDGTLRWLELDGLDIDDDMLLSLDLSTRFPDLVALSLFGNKLTSAELIVQEVIKFKNLKGLWLNNNPVLKNRDGELAGIILKELPELEIYNSTFTSNFGEWALGFCAGIYGKDNPAKAGQADSPVLSVSSLDLSNRNIHNLTNKEFSPICLPSLSYLNIRGNPLGQNSAAGLLDLLRRFPCLRSLEVDIPGPLGESAIEILESLPNISELNGICASTILETGKHVIDSVLRPRLPEWTPDEPIHDRIISAMWQYLMTYRLADEEKLDETSVWYAMDELGSALRHSDEPNFRVAPFLFMPEGNLASAVSFSILWPTKNVCKGDECTRDFLLGIGEEKQRSAKLTAWFHTPENYFIQEYEKYNQKLQTTSLIPPTTMQSSESRSIRPHDGRPLQVYTDIPHVVENLTHPEFAIIKDPKDADIIWTSVQVDEEMKNAAGLTDQQYINQFPFEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLSQLIGDYSARKREGLDNLWILKPWNMARTIDTTVTDNLPAIIRLMETGPKICQKYIEQPALFQGKKFDLRYVVLVRSMHPLEIFLSDCFWVRIANNQYSLDRSSLFEYETHFTVMNYRGRINHKNIKDFVREFEEEHQVKWLDIHTRVRNMIRSVFEAAAVAHPEMHSPTSRAMYGVDVMLDSSFQPKLLEVTYCPDCTRACKYDMDIVVGEGGVAKGSDFFNNVFRCLFLNEISQVSQL 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01250 874 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 4 873 IPR027749 -
Car01g01250 874 Gene3D Ribonuclease Inhibitor 130 249 IPR032675 -
Car01g01250 874 ProSiteProfiles TTL domain profile. 538 866 IPR004344 GO:0036211
Car01g01250 874 Gene3D - 668 847 - -
Car01g01250 874 SUPERFAMILY RNI-like 157 363 - -
Car01g01250 874 Gene3D Ribonuclease Inhibitor 268 384 IPR032675 -
Car01g01250 874 Pfam Tubulin-tyrosine ligase family 592 842 IPR004344 GO:0036211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01250 K16609 - gmx:100809212 1461.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01250 01 15541857 15550058 Car01g01250 01 15541857 15550058 ECH