Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01245 ATGGAAGAAGAAAACGTAAACGAAGAATTGAACGTTCTTGAACAATCTAGAAACCCTAACAACAACGCCAGAGACGAGAACGTTGTGAGGAGGAACGAATTCATGGAACGATTCAGAGATATAGCGAGAGAAAACGCAAGTCGTTTCGCTCTTTTTACCGATGTTGAAAACGATAATTTGTCTCCTGTAATTGAACAAGAGGAGAATGAAATCGAAGATTGGCCCGGTCCTTTTTCAACTGCTATAAAAATCATCAAGGATCGAGAGAAGAAAGGGATTCAAAGTCAATCAGGTTCTGCAAAGAAGAGTTTGATTGATTCAATAAAGTGGAATCCAAAACCGAATTCGGAGAAGTTAGGTGGAAAATGTTCTGTTCCGTCGTTGCAAGAACTTTGCATAAGAATACTTGCTAACAATGTTGATGCTATTGTTTCGCTTGAGACTGTGCCCGACGATTTTAGACATTGGCTTAGTCAGTTGCTGTGTGACTCGAGAAGAATTAATGACCATTTCTTTGAACTTCTTGTTGGTGGAACTCCTACGGAGATTCGGCTTCGAGATTGCTCATGGCTGTCTGAAGAACAATTTACCAAATGCTTTCAAATGTGTGACACTTCTAATTTGGTGGTACTGCAACTTGACCTATGTGGGCGCTGTTTGCCGGATTATGTAGTAGTTGCCACATTAGCACAGGCACCAAGGCGGTTACCTAGATTAACTCGTTTATCCATCAGTGGTGCATGTCGGCTCTCAGATGTGGGGTTGCGTGCACTTGTTTCTTCTGCTCCAATACTTACGTCAATAAATCTTAGCCAGTGCTCCCTTCTCACGGCTTCTAGCATTTATATTTTGGCTGAATCACTAAAACCTCTTCTAAAAGAGTTGTACCTTGATCATTGCCTTGGTATTGATGCTGCACTAATTGTTCCAGCACTGATTGAGCTTGAACATTTAGAAGTGTTGTCAGTGGCTGGTCTTCCAACTGTTTGCGATACATTTGTTAAGGATTACATTGTTGCACGTGGCCACAACATGAAAGAGCTTACTTTGAAAGACTGCATAAACTTGACTGATGCATCAATCAAAGTCGTTGCTGAACACTGTCCTGGAATATGTGTGCTTGATCTAATGAACGTCTGCAAATTAACAGATTTGTCCATAGGATATCTGACAAACAGTTGTCGGGCACTTCATACACTAAAGCTTTGCCGTAACCCATTCAGCGATGAAGCTATTGCTGCTTTTGTGGAGACTAATGGAAAGTCTTTGAAGGAATTGTCGCTTAATAACATTAAGAAGGTTGGTTATCACACAACCTTGTCACTTGCAAGCCATGCAAAAAATTTGCATAGTCTAGATGTATCTTGGTGCCGAAATTTGAGCGACAATGCAATGGGTTTGATAGTGGATAGTTGCTTGTCGCTGAGATTACTTAAAACTTTTGGATGCACTCAGATAACTGATGTTTTTCTGAAGGGTCACTCAAACACAGAGATCCAGATTATCGGTATAAAAATGACTCCTATCTCGCAAGTGACAGAACCAGGCGCCTTGAATTATTCATCGTTTCCGTAG 1575 0.4095 MEEENVNEELNVLEQSRNPNNNARDENVVRRNEFMERFRDIARENASRFALFTDVENDNLSPVIEQEENEIEDWPGPFSTAIKIIKDREKKGIQSQSGSAKKSLIDSIKWNPKPNSEKLGGKCSVPSLQELCIRILANNVDAIVSLETVPDDFRHWLSQLLCDSRRINDHFFELLVGGTPTEIRLRDCSWLSEEQFTKCFQMCDTSNLVVLQLDLCGRCLPDYVVVATLAQAPRRLPRLTRLSISGACRLSDVGLRALVSSAPILTSINLSQCSLLTASSIYILAESLKPLLKELYLDHCLGIDAALIVPALIELEHLEVLSVAGLPTVCDTFVKDYIVARGHNMKELTLKDCINLTDASIKVVAEHCPGICVLDLMNVCKLTDLSIGYLTNSCRALHTLKLCRNPFSDEAIAAFVETNGKSLKELSLNNIKKVGYHTTLSLASHAKNLHSLDVSWCRNLSDNAMGLIVDSCLSLRLLKTFGCTQITDVFLKGHSNTEIQIIGIKMTPISQVTEPGALNYSSFP 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01245 524 Gene3D Ribonuclease Inhibitor 115 336 IPR032675 -
Car01g01245 524 MobiDBLite consensus disorder prediction 1 25 - -
Car01g01245 524 Gene3D Ribonuclease Inhibitor 419 512 IPR032675 -
Car01g01245 524 PANTHER UNCHARACTERIZED 17 522 - -
Car01g01245 524 PANTHER F-BOX/LRR PROTEIN 17 522 - -
Car01g01245 524 SMART LRR_CC_2 342 367 IPR006553 -
Car01g01245 524 SMART LRR_CC_2 394 418 IPR006553 -
Car01g01245 524 SMART LRR_CC_2 420 445 IPR006553 -
Car01g01245 524 SMART LRR_CC_2 236 261 IPR006553 -
Car01g01245 524 SMART LRR_CC_2 446 471 IPR006553 -
Car01g01245 524 SMART LRR_CC_2 262 287 IPR006553 -
Car01g01245 524 SUPERFAMILY RNI-like 205 430 - -
Car01g01245 524 Gene3D Ribonuclease Inhibitor 337 415 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01245 Car-Chr1 15454274 15458670 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01245 K15082 - gmx:100808150 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01245 01 15454274 15458670 Car01g01245 01 15454274 15458670 ECH
Car07g00369 07 3254946 3258213 Car01g01245 01 15454274 15458670 PCT