Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01242 ATGGCTGGAATTACAAAGGAGGAAGAGTCAGGTAGTCCTAGTTGGGGTGCTTCGTTTTTTATGCAGACAACAGAAGACGTGGCTAGAGCCGTCGCTGCTGCTATGAATACTCCAAAGCCGTCTGTTATATATTCATCGAAAAATGATCATGGTGGTAGTCAGTTGCAAAGGCTGCAGTATCAAGTTACGAAAATGATAAAAGGATTTTCTCGCCCTTCTGAAGTTAAATATGCAAATTACAATCCAGAAATCCTGACAAGTCAGAAGCGTCAATGGGCTGCAAACTTTCATTTGCAGTACAATGATCATAAGTCTTGGAAGGAGCCAACAAGGTTATTTGAAAGTATGGTGGTGGTTGGTCTTCATCCTAATTGTGACATTCAGGCACTGCAAAGGCAATATCTTGTGAGAAAGTCCGAAGGCTCTGGTAAACTGAGAAGTGCACTTGGCTATCAGAATCAATCCCGTGTGGAGCCCAATGTTGAACCTCAGGTCTTATTCGTATATCCTCCAGAAAAGCAGTTGCCTCTTAAAGAAAAGGATCTTCTGTCTTTCTGTTTCCCTGGAGGTCTGGAGGTTAATGCTGTTGAGAGAACTCCTTCCATGAGTGAAATGAATGAAATTCTTTTTGGCCAGGAACACCTTAAACAAAGAGATCTGTCTTTTGTATTTAGGTTACAGGGTGCTGATAATTCAACACTTTATGGGTGCTGTGTCTTAGTTGAAGAGCTAGTGCAAAAACCCTCTGGATTGCTTTCCATGATTTCGGATAAGCAGTCATCTTATTCTTCTTTGAGACGCCAATCACGCCATATATTAACCACACAAAGATGTTACTGCATTCTCTCAAGGCTCCCATTTTTTGAGTTGCACTTTGGTGTATTGAACAGTATCTTCATGCAAGAAAGGCTGGAGCGGTTGACAAAAAGTGTTGAATATTTAAATTTAGAATTTGTTGAAGGTGGTTATGCGCAAGAAAACTCCGAAGAAAATTCAGTGTGTGTTATGGTGAATGATACACTAACTGAAGACAAACTTGATGAGAATCCAATAATTTCCCTAACCAAAAACATTGAGGGTGAAAGTAATCATCCAGAGAAACAAATGGTTAATGAAGAACAGCATATAGTCAAGGAAGGAGCAAATGATGACAATATTGTGCCTATTCATCTTGAAACTGAGAAAATAATTGCCAAAGAAGTATCTGGCCCTACAAATGCTGAAGATAGTAATATGTATGGGGATGCTTTGGTAACAAATAAACAGTCAGAAGATAGGCGTTTACCAAATGCTATTTTGCCCCTCCTACGGTATTGCCAGTATGAAAGCTCCGAATCTTCCTGCAGTTTTCAAGGTTCACCTTGTGAAGATAGAAATTTTAGGAGTGATGCTGATGATACTGAGACCGAAGAGGCTTCATTCTCAGGACAAGAAGATTTAAATGACCTACATGAGATTCTTGAATGGGCCAAGGCAAATAATTGTGGACCATTACAAATTATAAGTGAGTATTATCGTTTTGGGTGCCCTACAAGAGGCTCAACCCTTATTTTTCATCCTTTGGAGCACCTTCATCCCTTGGAATATCACAGACCTGATGAGAATGTTCTTTATTGTGCTGGTTCAACTGTTGATCTGAAATCGTGTAGTACGGGCCTGGAATTAGCTGAGGCACAAAACTTTCTTCTGGCTGCAGAGGAGGCAACTGCATTATCTATATGGGCTGTTGCGTGCTTATGTGGTACCTTGAGACTTGAACATGTGTTAACATTCTTTGCAGCAGCTCTACTGGAGAAGCAGATAGTAGTTGTCTGTTCTAATTTGGGAATCCTATCTGCGTCAGTTTTATCAGTTATTCCACTAATCCGACCTTACCAATGGCAAAGCCTTCTAATGCCGGTTTTACCAAACGACATGCTTGAGTTTCTGGAAGCACCTGTTCCTTACATAGTTGGTGTCAGGAACAAGACAAATGAAGTTCAGTCAAAGTTAACCAACGCCATTCTGGTTGATGCCAACAGAAACCAGGTGAAGTCGTCATCCCTACCTCAACTGCCAAGACAGAAAGAACTAATTGCTTCTTTACGTCCTTATCATGCAACTCTTGTGGGAGAAAGTTACTTGGGTAGGAGAAGGCCGGTGTACGAATGCACGGAAGTGCAGGTAGAAGCTGCCAATGGATTCTTATCAGTGTTAAGGTCTTATTTGGATTCCCTTTGCTGTAACATCCGTTCACATACAATAACCAATGTACAATCCAATGACGATAAGGTATCCTTGCTTTTGAGAGAGAGTTTCATTGACTCATTCCCGTCTCGTGATCGGCCTTTCATGAAGCTTTTTGTGGATACACAGCTCTTCTCAGTACACACAGATCTTGTTCTCTCTTTCTTCCAAAAGGAATAA 2406 0.4094 MAGITKEEESGSPSWGASFFMQTTEDVARAVAAAMNTPKPSVIYSSKNDHGGSQLQRLQYQVTKMIKGFSRPSEVKYANYNPEILTSQKRQWAANFHLQYNDHKSWKEPTRLFESMVVVGLHPNCDIQALQRQYLVRKSEGSGKLRSALGYQNQSRVEPNVEPQVLFVYPPEKQLPLKEKDLLSFCFPGGLEVNAVERTPSMSEMNEILFGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVQKPSGLLSMISDKQSSYSSLRRQSRHILTTQRCYCILSRLPFFELHFGVLNSIFMQERLERLTKSVEYLNLEFVEGGYAQENSEENSVCVMVNDTLTEDKLDENPIISLTKNIEGESNHPEKQMVNEEQHIVKEGANDDNIVPIHLETEKIIAKEVSGPTNAEDSNMYGDALVTNKQSEDRRLPNAILPLLRYCQYESSESSCSFQGSPCEDRNFRSDADDTETEEASFSGQEDLNDLHEILEWAKANNCGPLQIISEYYRFGCPTRGSTLIFHPLEHLHPLEYHRPDENVLYCAGSTVDLKSCSTGLELAEAQNFLLAAEEATALSIWAVACLCGTLRLEHVLTFFAAALLEKQIVVVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNDMLEFLEAPVPYIVGVRNKTNEVQSKLTNAILVDANRNQVKSSSLPQLPRQKELIASLRPYHATLVGESYLGRRRPVYECTEVQVEAANGFLSVLRSYLDSLCCNIRSHTITNVQSNDDKVSLLLRESFIDSFPSRDRPFMKLFVDTQLFSVHTDLVLSFFQKE 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01242 801 Pfam DENN (AEX-3) domain 555 673 IPR001194 -
Car01g01242 801 Pfam uDENN domain 163 240 IPR005113 -
Car01g01242 801 Gene3D - 102 315 - -
Car01g01242 801 SMART DENN_cls 274 675 IPR001194 -
Car01g01242 801 SMART uDENN_cls 109 242 IPR005113 -
Car01g01242 801 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 801 - -
Car01g01242 801 ProSiteProfiles Tripartite DENN domain profile. 147 801 IPR037516 -
Car01g01242 801 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 801 - -
Car01g01242 801 MobiDBLite consensus disorder prediction 446 476 - -
Car01g01242 801 Gene3D - 572 737 IPR043153 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01242 Car-Chr1 15367794 15379985 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01242 - - gmx:100782148 1347.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01242 01 15367794 15379985 Car01g01242 01 15367794 15379985 ECH
Car07g00366 07 3229472 3240310 Car01g01242 01 15367794 15379985 PCT