Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01238 ATGATGAGTCTAAGAACTTGTCCATCATTTTCCCTCACATTCTCTCCATCCAACAAACAAGTGAAAAAACTCTCCCCATCATTCAAACCCTACAACCAATCTCCACCGTCCAGATCATCAATCAAGATGTCTTCCATTTCCACAAACCATTCACAAGGTGTAGAACATATCGTACTCTTCAAAGTTAAAGAAAACACCGAATCCTCAAAAGTCAACGCCATGGTCAACGAGCTTCAATCCTTAGTAACTATTGAACAAGTTCGTCACCTCACTGTGGGCCCACTTcaacaaaacaacaaaataacatcaacaacaaTACCATTTTCTGATCTTAGTTACACTCACTTATTTCATAGTCGTTACGATTCAACGGAGGATCTTCAAACCTATATCGATCACCCAAACCACCTCAACGTTGTACGAGGTTTTTGTTTTCCTATATGCGACAACCTTTTTGTCGTCGATTGGGTGGCGGGAGACGTAGCTCTTCCGCCTCACCCTTCTCCGGGTACCGCCTTTCGTGTGAGTTTTTTGAAACTTAAGGACGAGGAGAACAGTAAACTTAAGGAGGAAGTATTTCGGGCGGTACGAGGTATTAAGGAAAGTGTTGGAGAAGTTAGTTATGTTTCTTGTGGTGAAAATATTACACCAGCTAGGGCAAAGGGATTCTCTATTGCTTCGCTTGTGGTTTTTCCCGGACGGAGGGAGATGGAACTTGTGGACCCTAGTGAAGGTTTGGTTAAGGTTAAGGAGCATTTGGAAAGTGTTGTGGTGGTTGATTATGTGGTTCCTTTGAAGTAG 801 0.4145 MMSLRTCPSFSLTFSPSNKQVKKLSPSFKPYNQSPPSRSSIKMSSISTNHSQGVEHIVLFKVKENTESSKVNAMVNELQSLVTIEQVRHLTVGPLQQNNKITSTTIPFSDLSYTHLFHSRYDSTEDLQTYIDHPNHLNVVRGFCFPICDNLFVVDWVAGDVALPPHPSPGTAFRVSFLKLKDEENSKLKEEVFRAVRGIKESVGEVSYVSCGENITPARAKGFSIASLVVFPGRREMELVDPSEGLVKVKEHLESVVVVDYVVPLK 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01238 266 PANTHER - 38 264 IPR044662 -
Car01g01238 266 SUPERFAMILY Dimeric alpha+beta barrel 52 161 IPR011008 -
Car01g01238 266 Pfam Stress responsive A/B Barrel Domain 54 157 IPR013097 -
Car01g01238 266 Pfam Stress responsive A/B Barrel Domain 174 262 IPR013097 -
Car01g01238 266 ProSiteProfiles Stress-response A/B barrel domain profile. 54 156 IPR013097 -
Car01g01238 266 PANTHER STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN UP3 38 264 - -
Car01g01238 266 SMART Dabb_2 54 158 IPR013097 -
Car01g01238 266 SMART Dabb_2 172 263 IPR013097 -
Car01g01238 266 MobiDBLite consensus disorder prediction 20 44 - -
Car01g01238 266 ProSiteProfiles Stress-response A/B barrel domain profile. 172 266 IPR013097 -
Car01g01238 266 Gene3D - 50 158 - -
Car01g01238 266 Gene3D - 173 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01238 Car-Chr1 15296783 15297583 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01238 - - aprc:113852330 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01238 01 15296783 15297583 Car01g01238 01 15296783 15297583 ECH
Car07g00362 07 3204070 3205564 Car01g01238 01 15296783 15297583 PCT