Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01233 ATGGCTTCCACTTCTGCAGTTTCAATGGCAATGCCACTAACTTACACCAGCCAGAAGACGGTGGTGTGTAGCTCTGGGGCATTCTTCAATCCACTGCCTCTTAGGTCTTCGAAGATTGTAGCATCATCAAAACACAATGGAAGGTTTCAAGTCAGGGCATCCATGAAAGAGAAAGTTGTGATGGGGCTCACGGCGGCTGCGTTGACAGCTTCTTTGATGGTTCCTGATGTGGCTGAAGCAGCCGTTTCACCTTCTCTCAAGAACTTCTTGCTAAGCATTGGAGCTGGTGGAGTTGTGGTTGCAGTCATTGTTGGTGCTGTGGTGGGTGTGTCCAATTTCGATCCCGTCAAGCGAAGCTGA 360 0.4944 MASTSAVSMAMPLTYTSQKTVVCSSGAFFNPLPLRSSKIVASSKHNGRFQVRASMKEKVVMGLTAAALTASLMVPDVAEAAVSPSLKNFLLSIGAGGVVVAVIVGAVVGVSNFDPVKRS 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01233 119 PANTHER EXPRESSED PROTEIN 1 119 - -
Car01g01233 119 Gene3D Single helix bin 81 119 - -
Car01g01233 119 PANTHER OS07G0673550 PROTEIN 1 119 - -
Car01g01233 119 Pfam Photosystem II reaction centre X protein (PsbX) 82 119 IPR009518 GO:0009523|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01233 Car-Chr1 15222878 15223740 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01233 - - gmx:100306291 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01233 01 15222878 15223740 Car01g01233 01 15222878 15223740 ECH
Car07g00359 07 3185968 3186857 Car01g01233 01 15222878 15223740 PCT