Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01230 ATGAGTTTCATCTTCGGAAAGAAAAAAACACCCGCAGAGCTTCTGCGGGAAAACAAGAGAATGTTGGACAAATCAATTAGGGAAATTGAGCGCGAGAGGCAAGGTTTACAAACACAAGAGAAGAAATTGATTTCAGAGATAAAGAAAAGCGCCAAACAAGGCCAGATGGGAGCTGTTAGAGTCATGGCAAAAGATCTTGTTAGAACAAGACATCAGATTGAAAAGTTTTACAAGCTAAAATCACAGCTCCAAGGTGTATCACTCAGAATTCAGACATTGAAATCAACACAAGCAATGGGTGAGGCAATGAAAGGTGTGACAAAGGCCATGGGGCAAATGAATAGGCAGATGAACTTGCCGAATTTGCAGAAAATCATGCAAGAATTTGAGAGACAGAACGAGAAGATGGAATTGACGATGGAAGTGATGGGAGACGCAATAGACGATGCTTTGgaaggggatgaagaagaagaagagacagacgaaCTAGTGAACCAGGTTCTTGATGAGATTGGAATCGACATAAACCAAGAGCTTGTAAATGCGCCATCATCAGCGGTTGCTGCACCCGCTGCAAAGGCAAAAGTAGCTCAAGTGGAAACGGCTGCAAACGATGATAGCGGAATAGACAGTGACTTACAGGCAAGATTAGACAACTTAAGAAAAATGTAG 672 0.4018 MSFIFGKKKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVRVMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPNLQKIMQEFERQNEKMELTMEVMGDAIDDALEGDEEEEETDELVNQVLDEIGIDINQELVNAPSSAVAAPAAKAKVAQVETAANDDSGIDSDLQARLDNLRKM 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01230 223 Gene3D - 6 181 - -
Car01g01230 223 Pfam Snf7 17 186 IPR005024 GO:0007034
Car01g01230 223 Coils Coil 119 146 - -
Car01g01230 223 Coils Coil 12 46 - -
Car01g01230 223 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 1 223 - -
Car01g01230 223 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 223 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01230 Car-Chr1 15169255 15173030 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01230 K12191 - pvy:116146833 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01230 01 15169255 15173030 Car01g01230 01 15169255 15173030 ECH