Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01221 ATGGATGAAGAAGAGAAGGTAGAAGTGAAGATATACCCTCTCAATTGTTACTATTTTGGATTTAAAGATTCTATTCCCTCCAAAGATCACTCTCTCCATGATCGTCTTCAGAGAATTCAATCCAACTATGCTGCCCGTGGAATGCGAACTTGTGTTGAAGCTGTTATAATGGTTGAGTTGTTCAAACATCCGCATTTGTTGCTCTTTCAAATAAAAAATTTGATCTTTAAACTTCCTGGTGGCCGTTTAAGGCCAGGTGAATCAGATATCGATGGATTGAAGCGGAAGCTGGGAAGGAAGCTTTCTGTAGATGAAGATGGCGACGGGGCAGAATGGGAGGTCGGAGAGTGTCTTGGAATGTGGTGGAGACCTGATTTTGAAACATTAATGTATCCTTTCTTACCACCTAATGTCAAACATCCAAAGGAATGTACAAAACTCTTCCTTGTTAAGCTTCCGGAAAGTCGAAGGTTCACTGTGCCAAGGAACATGAAGTTGCTTTCAGTTCCATTGTGCCAAATTCATGAAAATCACAAGAGAAAAAATATTGATGGAGGCTGCATTGGAGGCTATGTTTGGATCAAGCAAGCAACAAGTCAAGACGAGTTTTGA 612 0.4085 MDEEEKVEVKIYPLNCYYFGFKDSIPSKDHSLHDRLQRIQSNYAARGMRTCVEAVIMVELFKHPHLLLFQIKNLIFKLPGGRLRPGESDIDGLKRKLGRKLSVDEDGDGAEWEVGECLGMWWRPDFETLMYPFLPPNVKHPKECTKLFLVKLPESRRFTVPRNMKLLSVPLCQIHENHKRKNIDGGCIGGYVWIKQATSQDEF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01221 203 PANTHER PRE-MRNA CLEAVAGE FACTOR IM 25 KDA SUBUNIT 1 3 179 - -
Car01g01221 203 SUPERFAMILY Nudix 53 125 IPR015797 -
Car01g01221 203 PIRSF CPSF-25 1 190 IPR016706 GO:0003729|GO:0005849|GO:0006378
Car01g01221 203 Pfam Nucleotide hydrolase 8 183 IPR016706 GO:0003729|GO:0005849|GO:0006378
Car01g01221 203 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 3 179 IPR016706 GO:0003729|GO:0005849|GO:0006378
Car01g01221 203 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 7 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01221 Car-Chr1 15000194 15002887 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01221 K14397 - gmx:100791216 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01221 01 15000194 15002887 Car01g01221 01 15000194 15002887 ECH