Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01211 ATGGAGTGCGTTGGAGCGAGAAACTTAACGGCAATGGCGTTTTGCTTAAGTCCTTCTTCGAGGTTACGGTTAAGGAGAAAGAAGCTTTGGAGAAGAAGAGGAGCTTCGTCGACTTACGGTAACGCTATTCGGTTGCGTTCGCATTCTGTGAAGGTGGAGGAAAAAGCAGAGAGTTGCGTTGTTGCTAAAGAGGATTTCGCCGATGAGGAGGATTTCGTTAAGGCTGGTGGTTCTGAACTCGTTTTCGTTGAAATGCAGCAGAAGAAAGCTATGGAAATGCAATCTAAGCTTGCAGATAAGTTGCCACCTATCTCTATTGGAGATGAAATACTGGATCTAGTTGTGATTGGTTGTGGTCCTGCTGGTCTTGCTCTAGCTGCTGAAGCTGGCAAGTTAGGATTAAAAGTTGGGCTTATTGGTCCAGATCTCCCTTTTACAAACAATTATGGTGTGTGGGAGGAAGAATTTAAAGGTCTTGGACTTGAAGGTTGTATTGAGCATGTTTGGAAGGATACCATTGTATATATTGATGATAAAGATCCCATTTCAATTGGACGTTCTTATGGCCGTGTCAGTCGGCATTTGCTTCATGAGGAATTGTTAAGAAGGTGTGTCGAGTCAGGTGTCTCGTATCTTAGCTCAAGAGTAGAAAGGATTGTTGAGGCTAGCAATGGTCATAATCATGTTGTCTGTGAATATGATTTTGTAGTGCCCTGCAGGCTTGCTACTGTTGCATCAGGAGCAGCTTCAGGGAAACTATTGCAGTATGAGGTTGGGGGTCCAAAGGTGTGTGTCCAAACAGCTTATGGTGTTGAAGTTGAGGTGGAAGACAGTCCTTATGATCCAAACGTGATGGTGTTCATGGATTACAGAGATTATATGAAGAAAAATGTTAAATGTCTAGAAGCTGACTATCCAACATTTCTTTATGCAATGCCCGTGTCTCGTACAAGAGTGTTCTTCGAGGAAACATGTTTGGCATCAAAAGATGCCATGCCTTTTGATTTATTAAAGAAAAAGCTCTTTTCAAGATTAAATACGATGGGGATCAGAATTGCAAAAACTTATGAAGAGGAATGGTCTTATATCCCAGTTGGTGGATCCTTACCGAACACAGAGCAGAAGAACCTTGCATTTGGTGCAGCTGCCAGCATGGTGCATCCAGCCACAGGCTATTCTGTTGTGAGATCTTTGTCAGAAGCTCCAGAATATGCTTCAGTAATTGCCACTATTTTGAATGATGGTAATGCAAGGAACATTGTTGCTCGTGGAAGAAGTAAGGAGAATCTATCTATGCGAGCTTGGAATACACTTTGGCCACAAGAAAGGAAACGGCAGAGATCATTCTTTCTTTTTGGCTTAGCACTGATTGTGCAGCTGGACATTGAGGGCACTAGAACATTCTTTCGTACTTTCTTCTGCTTACCTGAGTGGATGTGGCAAGGATTTCTTGGCTCTTCTCTATCCTCTACAGATCTTTTATTATTTGCATTCTACATGTTCATAATAGCACCAAATACCTTAAGAATGTCTCTAGTCAGACATCTCCTTTCAGATCCTACAGGGTCGACTATGATAAAGACCTACTTGACGATATAG 1599 0.4221 MECVGARNLTAMAFCLSPSSRLRLRRKKLWRRRGASSTYGNAIRLRSHSVKVEEKAESCVVAKEDFADEEDFVKAGGSELVFVEMQQKKAMEMQSKLADKLPPISIGDEILDLVVIGCGPAGLALAAEAGKLGLKVGLIGPDLPFTNNYGVWEEEFKGLGLEGCIEHVWKDTIVYIDDKDPISIGRSYGRVSRHLLHEELLRRCVESGVSYLSSRVERIVEASNGHNHVVCEYDFVVPCRLATVASGAASGKLLQYEVGGPKVCVQTAYGVEVEVEDSPYDPNVMVFMDYRDYMKKNVKCLEADYPTFLYAMPVSRTRVFFEETCLASKDAMPFDLLKKKLFSRLNTMGIRIAKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPEYASVIATILNDGNARNIVARGRSKENLSMRAWNTLWPQERKRQRSFFLFGLALIVQLDIEGTRTFFRTFFCLPEWMWQGFLGSSLSSTDLLLFAFYMFIIAPNTLRMSLVRHLLSDPTGSTMIKTYLTI 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01211 532 PANTHER - 5 491 - -
Car01g01211 532 PANTHER LYCOPENE EPSILON CYCLASE, CHLOROPLASTIC ISOFORM X1 5 491 - -
Car01g01211 532 SUPERFAMILY FAD/NAD(P)-binding domain 108 505 IPR036188 -
Car01g01211 532 TIGRFAM carotene-cycl: lycopene cyclase family protein 112 512 IPR010108 GO:0016117|GO:0016705
Car01g01211 532 Gene3D - 110 448 IPR036188 -
Car01g01211 532 Pfam Lycopene cyclase protein 112 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01211 Car-Chr1 14860742 14867580 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01211 K06444 - gmx:100788180 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01211 01 14860742 14867580 Car01g01211 01 14860742 14867580 ECH